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stx2B Shiga toxin subunit B [ Enterobacteria phage VT2-Sakai ]

Gene ID: 1262250, updated on 31-May-2023

Summary

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Gene symbol
stx2B
Gene description
Shiga toxin subunit B
Locus tag
VT2-Sap43
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Enterobacteria phage VT2-Sakai (nat-host: Escherichia coli O157:H7, synonym: Bacteriophage VT2-Sa)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Sepvirinae; Traversvirus
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Genomic context

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Sequence:
NC_000902.1 (21924..22193)

NC_000902.1Genomic Context describing neighboring genes Neighboring gene tRNA-Arg Neighboring gene Shiga toxin subunit A Neighboring gene SASA family carbohydrate esterase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000902.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence analysis of Stx2-converting phage VT2-Sa shows a great divergence in early regulation and replication regions. Miyamoto H, et al. DNA Res, 1999 Aug 31. PMID 10492170

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
Shiga toxin subunit B

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000902.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_050540.1 Shiga toxin subunit B [Enterobacteria phage VT2-Sakai]

    See identical proteins and their annotated locations for NP_050540.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0N6WEK1, A0A0N6WEQ6, A0A0N6WEW2, A0A0N6WGJ5, A0A0N7BUN5, A0A0N7BYP2, A0A0N7BYW4, A0A0N7BZ90, A0A0N7BZJ6, A0A0N7BZT6, A0A0N7BZY4, A0A0N7C010, A0A0N7C0C2, A0A0N7C1Y4, A0A0N7C2X4, A0A0N7C332, A0A0N7C3H5, A0A0N7C450, A0A0N7CGP1, Q776E0, Q776Q2, Q7AK26
    Conserved Domains (1) summary
    pfam02258
    Location:21 → 86
    SLT_beta; Shiga-like toxin beta subunit
Nucleotide Protein
Heading Accession and Version

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