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LOC127273936 H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87643890-87644537 [ Homo sapiens (human) ]

Gene ID: 127273936, updated on 12-Sep-2024

Summary

Gene symbol
LOC127273936
Gene description
H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87643890-87644537
Gene type
biological region
Feature type(s)
regulatory: enhancer
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
This genomic region was validated as an active enhancer by the ChIP-STARR-seq massively parallel reporter assay in naive and primed human embryonic stem cells. This enhancer is marked by the H3K27ac and H3K4me1 histone modifications. [provided by RefSeq, Oct 2022]
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Genomic context

See LOC127273936 in Genome Data Viewer
Location:
chromosome: 2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (87416767..87417414)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (87643890..87644537)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124907854 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:91757725-91758235 Neighboring gene uncharacterized LOC105377635 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87581544-87582388 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87582389-87583233 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87623699-87624202 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87624203-87624704 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87633283-87633789 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87633790-87634295 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87641303-87641844 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87641845-87642385 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87642477-87643119 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87643120-87643761 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87644538-87645184 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87645185-87645831 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87645832-87646477 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:87720936-87721436 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87647813-87648776 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87648777-87649739 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87724395-87725207 Neighboring gene long intergenic non-protein coding RNA 1943 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87756227-87756812 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:87762086-87762942 Neighboring gene uncharacterized LOC124906032 Neighboring gene cytoskeleton regulator RNA Neighboring gene NK cell activity associated lncRNA 1

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_095786.1 

    Range
    101..748
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    87416767..87417414
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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