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asRNA:CR43460 antisense RNA:CR43460 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 12797900, updated on 11-Sep-2024

Summary

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Official Symbol
asRNA:CR43460provided by FlyBase
Official Full Name
antisense RNA:CR43460provided by FlyBase
Primary source
FLYBASE:FBgn0263414
Locus tag
Dmel_CR43460
See related
AllianceGenome:FB:FBgn0263414
Gene type
ncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR43460; Dmel\CR43460
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Genomic context

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See asRNA:CR43460 in Genome Data Viewer
Location:
88A3-88A3; 3-54 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (13971733..13974675)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (9797455..9800397)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene stable intronic sequence RNA CR46363 Neighboring gene Origin recognition complex subunit 2 Neighboring gene roadkill Neighboring gene Cytochrome P450 6d5 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
  2. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
  3. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • asRNA:CR43460-RA; Dmel\asRNA:CR43460-RA; CR43460-RA; Dmel\CR43460-RA
  • asRNA:CR43460-RB; Dmel\asRNA:CR43460-RB; CR43460-RB; Dmel\CR43460-RB
  • asRNA:CR43460-RC; Dmel\asRNA:CR43460-RC; CR43460-RC; Dmel\CR43460-RC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    13971733..13974675
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_048388.1 RNA Sequence

    Status: REVIEWED

  2. NR_048386.1 RNA Sequence

    Status: REVIEWED

  3. NR_048387.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials