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lncRNA:CR43097 long non-coding RNA:CR43097 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 12798019, updated on 11-Sep-2024

Summary

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Official Symbol
lncRNA:CR43097provided by FlyBase
Official Full Name
long non-coding RNA:CR43097provided by FlyBase
Primary source
FLYBASE:FBgn0262543
Locus tag
Dmel_CR43097
See related
AllianceGenome:FB:FBgn0262543
Gene type
ncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG43097; CR43097; Dmel\CR43097
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Genomic context

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See lncRNA:CR43097 in Genome Data Viewer
Location:
38A7-38A7; 2-54 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (19910648..19911811, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (19910648..19911811, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene small nuclear RNA U5 at 38AB b Neighboring gene sickie Neighboring gene uncharacterized protein Neighboring gene Turandot F Neighboring gene Turandot E

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The NAV2 homolog Sickie regulates F-actin-mediated axonal growth in Drosophila mushroom body neurons via the non-canonical Rac-Cofilin pathway. Abe T, et al. Development, 2014 Dec. PMID 25411210
  2. Diverse and pervasive subcellular distributions for both coding and long noncoding RNAs. Wilk R, et al. Genes Dev, 2016 Mar 1. PMID 26944682, Free PMC Article
  3. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
  4. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • lncRNA:CR43097-RA; Dmel\lncRNA:CR43097-RA; CR43097-RA; Dmel\CR43097-RA
  • lncRNA:CR43097-RB; Dmel\lncRNA:CR43097-RB; CR43097-RB; Dmel\CR43097-RB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    19910648..19911811 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_073808.1 RNA Sequence

    Status: REVIEWED

  2. NR_048013.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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