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lncRNA:CR9284 long non-coding RNA:CR9284 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 12798136, updated on 11-Sep-2024

Summary

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Official Symbol
lncRNA:CR9284provided by FlyBase
Official Full Name
long non-coding RNA:CR9284provided by FlyBase
Primary source
FLYBASE:FBgn0046297
Locus tag
Dmel_CR9284
See related
AllianceGenome:FB:FBgn0046297
Gene type
ncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-WO0140519.157; BEST:GH11908; bs30g10.y1; CG9284; CR9284; Dmel\CR9284; Tes101
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Genomic context

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See lncRNA:CR9284 in Genome Data Viewer
Location:
58A2-58A2; 2-97 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (21803402..21804338)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (17690907..17691843)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene tracheal-prostasin Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic analysis of Drosophila chromosome underreplication reveals a link between replication control and transcriptional territories. Belyakin SN, et al. Proc Natl Acad Sci U S A, 2005 Jun 7. PMID 15928082, Free PMC Article
  2. Transcriptional activation in Drosophila spermatogenesis involves the mutually dependent function of aly and a novel meiotic arrest gene cookie monster. Jiang J, et al. Development, 2003 Feb. PMID 12490562
  3. Spatially revealed roles for lncRNAs in Drosophila spermatogenesis, Y chromosome function and evolution. Shao Z, et al. Nat Commun, 2024 May 7. PMID 38714658, Free PMC Article
  4. Rapidly evolving genes of Drosophila: differing levels of selective pressure in testis, ovary, and head tissues between sibling species. Jagadeeshan S, et al. Mol Biol Evol, 2005 Sep. PMID 15917496
  5. Conserved properties of Drosophila and human spermatozoal mRNA repertoires. Fischer BE, et al. Proc Biol Sci, 2012 Jul 7. PMID 22378807, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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  • lncRNA:CR9284-RD; Dmel\lncRNA:CR9284-RD; CR9284-RD; Dmel\CR9284-RD
  • lncRNA:CR9284-RE; Dmel\lncRNA:CR9284-RE; CR9284-RE; Dmel\CR9284-RE

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    21803402..21804338
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_124684.1 RNA Sequence

    Status: REVIEWED

  2. NR_124685.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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