U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

lncRNA:CR43356 long non-coding RNA:CR43356 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 12798164, updated on 9-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
lncRNA:CR43356provided by FlyBase
Official Full Name
long non-coding RNA:CR43356provided by FlyBase
Primary source
FLYBASE:FBgn0263088
Locus tag
Dmel_CR43356
See related
AllianceGenome:FB:FBgn0263088
Gene type
ncRNA
RNA name
lncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR43356; Dmel\CR43356
Summary
Involved in spermatogenesis. [provided by Alliance of Genome Resources, Dec 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See lncRNA:CR43356 in Genome Data Viewer
Location:
33D2-33D2; 2-46 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (12174090..12174638, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (12174090..12174638, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Zinc transporter 33D Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene atilla Neighboring gene crooked Neighboring gene bruno 1 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Critical roles of long noncoding RNAs in Drosophila spermatogenesis. Wen K, et al. Genome Res, 2016 Sep. PMID 27516619, Free PMC Article
  2. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
  3. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help
  • lncRNA:CR43356-RA; Dmel\lncRNA:CR43356-RA; CR43356-RA; Dmel\CR43356-RA

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in spermatogenesis IMP
Inferred from Mutant Phenotype
more info
 PubMed 

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    12174090..12174638 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_047942.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.