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mir-4968 mir-4968 stem loop [ Drosophila melanogaster (fruit fly) ]

Gene ID: 12798200, updated on 11-Sep-2024

Summary

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Official Symbol
mir-4968provided by FlyBase
Official Full Name
mir-4968 stem loopprovided by FlyBase
Primary source
FLYBASE:FBgn0263569
Locus tag
Dmel_CR43554
See related
miRBase:MI0017754; AllianceGenome:FB:FBgn0263569
Gene type
ncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR43554; dme-mir-4968; dme-miR-4968; Dmel\CR43554; miR-4968
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Genomic context

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See mir-4968 in Genome Data Viewer
Location:
68C13-68C13; 3-36 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (11552539..11552693, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (11545639..11545793, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Salivary gland secretion 3 Neighboring gene uncharacterized protein Neighboring gene alpha-L-fucosidase Neighboring gene Mob2 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Regulation of circadian rhythm and sleep by miR-375-timeless interaction in Drosophila. Xia X, et al. FASEB J, 2020 Dec. PMID 33078445, Free PMC Article
  2. A Drosophila LexA Enhancer-Trap Resource for Developmental Biology and Neuroendocrine Research. Kockel L, et al. G3 (Bethesda), 2016 Oct 13. PMID 27527793, Free PMC Article
  3. Pgc suppresses the zygotically acting RNA decay pathway to protect germ plasm RNAs in the Drosophila embryo. Hanyu-Nakamura K, et al. Development, 2019 Apr 4. PMID 30890569
  4. Global identification of functional microRNA-mRNA interactions in Drosophila. Wessels HH, et al. Nat Commun, 2019 Apr 9. PMID 30967537, Free PMC Article
  5. microRNAs selectively protect hub cells of the germline stem cell niche from apoptosis. Volin M, et al. J Cell Biol, 2018 Nov 5. PMID 30093492, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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  • mir-4968-RA; Dmel\mir-4968-RA; CR43554-RA; Dmel\CR43554-RA
  • mir-4968-RB; Dmel\mir-4968-RB; CR43554-RB; Dmel\CR43554-RB
  • mir-4968-RM; Dmel\mir-4968-RM; CR43554-RM; Dmel\CR43554-RM

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    11552539..11552693 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_048256.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

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Research Materials