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lncRNA:iab8 long non-coding RNA:iab8 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 12798430, updated on 9-Dec-2024

Summary

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Official Symbol
lncRNA:iab8provided by FlyBase
Official Full Name
long non-coding RNA:iab8provided by FlyBase
Primary source
FLYBASE:FBgn0264857
Locus tag
Dmel_CR43261
See related
AllianceGenome:FB:FBgn0264857
Gene type
ncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG31270; CR43261; Dmel\CR43261; iab; iab lncRNA; iab-8; iab-8 ncRNA; iab-8ncRNA; lncRNA-iab-8; miR-iab-8; mpa; msa
Old locus tag
Dmel_CG31270
Summary
Is expressed in embryonic abdominal segment 8; embryonic abdominal segment 9; male accessory gland secondary cell; and parasegment 15. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See lncRNA:iab8 in Genome Data Viewer
Location:
89E2-89E4; 3-59 cM
Exon count:
14
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (16831116..16923231, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (12656838..12748953, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long noncoding RNA: testis-specific 16 Neighboring gene abdominal A Neighboring gene MSA micropeptide Neighboring gene long non-coding RNA:iab4 Neighboring gene mir-iab-4 stem loop Neighboring gene mir-iab-8 stem loop Neighboring gene long non-coding RNA:CR43617 Neighboring gene Abdominal B Neighboring gene long non-coding RNA:CR46267 Neighboring gene Vacuolar H[+] ATPase M9.7 subunit d

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Following the intracellular localization of the iab-8ncRNA of the bithorax complex using the MS2-MCP-GFP system. Arib G, et al. Mech Dev, 2015 Nov. PMID 26277563
  2. Noncoding RNAs of the Ultrabithorax domain of the Drosophila bithorax complex. Pease B, et al. Genetics, 2013 Dec. PMID 24077301, Free PMC Article
  3. Genomic and functional conservation of lncRNAs: lessons from flies. Camilleri-Robles C, et al. Mamm Genome, 2022 Jun. PMID 35098341, Free PMC Article
  4. Repression of the Hox gene abd-A by ELAV-mediated Transcriptional Interference. Castro Alvarez JJ, et al. PLoS Genet, 2021 Nov. PMID 34780465, Free PMC Article
  5. abd-A regulation by the iab-8 noncoding RNA. Gummalla M, et al. PLoS Genet, 2012. PMID 22654672, Free PMC Article

See all (43) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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  • alternate names: iab-8 non-coding RNA; male-specific abdominal; infraabdominal-8; non-coding RNA iab8; iab-8; male specific abdominal
  • lncRNA:iab8-RA; Dmel\lncRNA:iab8-RA; CR43261-RA; Dmel\CR43261-RA
  • lncRNA:iab8-RB; Dmel\lncRNA:iab8-RB; CR43261-RB; Dmel\CR43261-RB
  • lncRNA:iab8-RC; Dmel\lncRNA:iab8-RC; CR43261-RC; Dmel\CR43261-RC
  • lncRNA:iab8-RD; Dmel\lncRNA:iab8-RD; CR43261-RD; Dmel\CR43261-RD
  • lncRNA:iab8-RE; Dmel\lncRNA:iab8-RE; CR43261-RE; Dmel\CR43261-RE
  • lncRNA:iab8-RF; Dmel\lncRNA:iab8-RF; CR43261-RF; Dmel\CR43261-RF
  • lncRNA:iab8-RG; Dmel\lncRNA:iab8-RG; CR43261-RG; Dmel\CR43261-RG
  • lncRNA:iab8-RH; Dmel\lncRNA:iab8-RH; CR43261-RH; Dmel\CR43261-RH
  • lncRNA:iab8-RI; Dmel\lncRNA:iab8-RI; CR43261-RI; Dmel\CR43261-RI
  • lncRNA:iab8-RJ; Dmel\lncRNA:iab8-RJ; CR43261-RJ; Dmel\CR43261-RJ
  • lncRNA:iab8-RK; Dmel\lncRNA:iab8-RK; CR43261-RK; Dmel\CR43261-RK
  • lncRNA:iab8-RL; Dmel\lncRNA:iab8-RL; CR43261-RL; Dmel\CR43261-RL

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    16831116..16923231 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_074022.1 RNA Sequence

    Status: REVIEWED

  2. NR_074021.1 RNA Sequence

    Status: REVIEWED

  3. NR_074020.1 RNA Sequence

    Status: REVIEWED

  4. NR_074019.1 RNA Sequence

    Status: REVIEWED

  5. NR_048414.1 RNA Sequence

    Status: REVIEWED

  6. NR_048415.2 RNA Sequence

    Status: REVIEWED

  7. NR_074018.1 RNA Sequence

    Status: REVIEWED

  8. NR_048412.2 RNA Sequence

    Status: REVIEWED

  9. NR_048413.2 RNA Sequence

    Status: REVIEWED

  10. NR_074023.1 RNA Sequence

    Status: REVIEWED

  11. NR_074024.1 RNA Sequence

    Status: REVIEWED

  12. NR_074025.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
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