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Dgka diacylglycerol kinase, alpha [ Mus musculus (house mouse) ]

Gene ID: 13139, updated on 27-Nov-2024

Summary

Official Symbol
Dgkaprovided by MGI
Official Full Name
diacylglycerol kinase, alphaprovided by MGI
Primary source
MGI:MGI:102952
See related
Ensembl:ENSMUSG00000025357 AllianceGenome:MGI:102952
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
80kDa; Dagk1
Summary
Enables ATP-dependent diacylglycerol kinase activity and phospholipid binding activity. Predicted to be involved in glycerolipid metabolic process; intracellular signal transduction; and lipid phosphorylation. Located in cytosol and plasma membrane. Is expressed in several structures, including alimentary system; cranial ganglion; integumental system; respiratory system; and sensory organ. Orthologous to human DGKA (diacylglycerol kinase alpha). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Broad expression in thymus adult (RPKM 101.8), spleen adult (RPKM 51.2) and 15 other tissues See more
Orthologs
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Genomic context

See Dgka in Genome Data Viewer
Location:
10 D3; 10 77.14 cM
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (128556000..128581002, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (128720131..128745084, complement)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein L12 pseudogene Neighboring gene RAB5B, member RAS oncogene family Neighboring gene STARR-positive B cell enhancer ABC_E50 Neighboring gene STARR-positive B cell enhancer ABC_E2974 Neighboring gene premelanosome protein Neighboring gene cyclin dependent kinase 2 Neighboring gene STARR-positive B cell enhancer ABC_E5201 Neighboring gene STARR-seq mESC enhancer starr_28299 Neighboring gene STARR-positive B cell enhancer ABC_E10661 Neighboring gene STARR-seq mESC enhancer starr_28300 Neighboring gene predicted gene, 31504 Neighboring gene PYM homolog 1, exon junction complex associated factor Neighboring gene ribosomal protein SA, pseudogene 2 Neighboring gene matrix metallopeptidase 19 Neighboring gene transmembrane protein 198b

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 
  • Gene trapped (1) 
  • Targeted (1)  1 citation
  • Transgenic (1) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables ATP-dependent diacylglycerol kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables ATP-dependent diacylglycerol kinase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables ATP-dependent diacylglycerol kinase activity ISO
Inferred from Sequence Orthology
more info
 
enables alkylglycerol kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 
enables kinase activity ISO
Inferred from Sequence Orthology
more info
 
enables lipid binding ISO
Inferred from Sequence Orthology
more info
 
enables phospholipid binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in diacylglycerol metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in diacylglycerol metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in diacylglycerol metabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in glycerolipid metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in intracellular signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in lipid phosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in lipid phosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in phosphatidic acid biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in phosphatidic acid biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
involved_in phosphatidic acid biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in phospholipase C-activating G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
diacylglycerol kinase alpha
Names
80 kDa diacylglycerol kinase
DAG kinase alpha
DGK-alpha
diacylglycerol kinase alpha Flt2-Pr2
diglyceride kinase alpha
NP_001345674.1
NP_001345675.1
NP_001359295.1
NP_001360957.1
NP_058091.2
XP_011241653.2
XP_011241661.1
XP_011241665.2
XP_017169275.2
XP_017169279.2
XP_030100725.1
XP_036011466.1
XP_036011467.1
XP_036011468.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001358745.2NP_001345674.1  diacylglycerol kinase alpha isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC131081
    Consensus CDS
    CCDS24290.1
    UniProtKB/Swiss-Prot
    O88673, Q922X2
    UniProtKB/TrEMBL
    R4I4W1
    Conserved Domains (5) summary
    smart00045
    Location:515696
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:374494
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00051
    Location:115184
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam00130
    Location:207255
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    pfam14513
    Location:4111
    DAG_kinase_N; Diacylglycerol kinase N-terminus
  2. NM_001358746.2NP_001345675.1  diacylglycerol kinase alpha isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC131081
    Consensus CDS
    CCDS24290.1
    UniProtKB/Swiss-Prot
    O88673, Q922X2
    UniProtKB/TrEMBL
    R4I4W1
    Conserved Domains (5) summary
    smart00045
    Location:515696
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:374494
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00051
    Location:115184
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam00130
    Location:207255
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    pfam14513
    Location:4111
    DAG_kinase_N; Diacylglycerol kinase N-terminus
  3. NM_001372366.1NP_001359295.1  diacylglycerol kinase alpha isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC131081
    UniProtKB/TrEMBL
    R4I4W1
    Conserved Domains (6) summary
    smart00045
    Location:550731
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:409529
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00051
    Location:150219
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam14513
    Location:39146
    DAG_kinase_N; Diacylglycerol kinase N-terminus
    cd20890
    Location:306367
    C1_DGKalpha_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase alpha (DAG kinase alpha) and similar proteins
    cl00040
    Location:237297
    C1; protein kinase C conserved region 1 (C1 domain) superfamily
  4. NM_001374028.2NP_001360957.1  diacylglycerol kinase alpha isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC131081
    UniProtKB/TrEMBL
    R4I4W1
    Conserved Domains (5) summary
    smart00045
    Location:538719
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:397517
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00051
    Location:138207
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam00130
    Location:230278
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    pfam14513
    Location:4134
    DAG_kinase_N; Diacylglycerol kinase N-terminus
  5. NM_001428430.1NP_001415359.1  diacylglycerol kinase alpha isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC131081
  6. NM_001428431.1NP_001415360.1  diacylglycerol kinase alpha isoform 5

    Status: VALIDATED

    Source sequence(s)
    AC131081
  7. NM_001428432.1NP_001415361.1  diacylglycerol kinase alpha isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC131081
  8. NM_016811.4NP_058091.2  diacylglycerol kinase alpha isoform 1

    See identical proteins and their annotated locations for NP_058091.2

    Status: VALIDATED

    Source sequence(s)
    AC131081
    Consensus CDS
    CCDS24290.1
    UniProtKB/Swiss-Prot
    O88673, Q922X2
    UniProtKB/TrEMBL
    R4I4W1
    Related
    ENSMUSP00000026414.8, ENSMUST00000026414.9
    Conserved Domains (5) summary
    smart00045
    Location:515696
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:374494
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00051
    Location:115184
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam00130
    Location:207255
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    pfam14513
    Location:4111
    DAG_kinase_N; Diacylglycerol kinase N-terminus

RNA

  1. NR_190347.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC131081

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    128556000..128581002 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036155574.1XP_036011467.1  diacylglycerol kinase alpha isoform X6

    UniProtKB/TrEMBL
    R4I4W1
    Conserved Domains (5) summary
    smart00045
    Location:373554
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:232352
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00051
    Location:142
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cd20890
    Location:129190
    C1_DGKalpha_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase alpha (DAG kinase alpha) and similar proteins
    cl00040
    Location:60120
    C1; protein kinase C conserved region 1 (C1 domain) superfamily
  2. XM_036155575.1XP_036011468.1  diacylglycerol kinase alpha isoform X6

    UniProtKB/TrEMBL
    R4I4W1
    Conserved Domains (5) summary
    smart00045
    Location:373554
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:232352
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00051
    Location:142
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cd20890
    Location:129190
    C1_DGKalpha_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase alpha (DAG kinase alpha) and similar proteins
    cl00040
    Location:60120
    C1; protein kinase C conserved region 1 (C1 domain) superfamily
  3. XM_030244865.2XP_030100725.1  diacylglycerol kinase alpha isoform X5

    UniProtKB/Swiss-Prot
    O88673, Q922X2
    UniProtKB/TrEMBL
    R4I4W1
    Conserved Domains (5) summary
    smart00045
    Location:515696
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:374494
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00051
    Location:115184
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam00130
    Location:207255
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    pfam14513
    Location:4111
    DAG_kinase_N; Diacylglycerol kinase N-terminus
  4. XM_011243359.3XP_011241661.1  diacylglycerol kinase alpha isoform X4

    See identical proteins and their annotated locations for XP_011241661.1

    UniProtKB/TrEMBL
    R4I4W1
    Conserved Domains (5) summary
    smart00045
    Location:538719
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:397517
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00051
    Location:138207
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam00130
    Location:230278
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    pfam14513
    Location:4134
    DAG_kinase_N; Diacylglycerol kinase N-terminus
  5. XM_011243351.3XP_011241653.2  diacylglycerol kinase alpha isoform X3

    UniProtKB/TrEMBL
    R4I4W1
    Conserved Domains (6) summary
    smart00045
    Location:550731
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:409529
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00051
    Location:150219
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam14513
    Location:39146
    DAG_kinase_N; Diacylglycerol kinase N-terminus
    cd20890
    Location:306367
    C1_DGKalpha_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase alpha (DAG kinase alpha) and similar proteins
    cl00040
    Location:237297
    C1; protein kinase C conserved region 1 (C1 domain) superfamily
  6. XM_017313786.3XP_017169275.2  diacylglycerol kinase alpha isoform X2

    UniProtKB/TrEMBL
    R4I4W1
    Conserved Domains (6) summary
    smart00045
    Location:550731
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:409529
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00051
    Location:150219
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam14513
    Location:39146
    DAG_kinase_N; Diacylglycerol kinase N-terminus
    cd20890
    Location:306367
    C1_DGKalpha_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase alpha (DAG kinase alpha) and similar proteins
    cl00040
    Location:237297
    C1; protein kinase C conserved region 1 (C1 domain) superfamily
  7. XM_036155573.1XP_036011466.1  diacylglycerol kinase alpha isoform X1

    UniProtKB/TrEMBL
    R4I4W1
    Conserved Domains (6) summary
    smart00045
    Location:573754
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:432552
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00051
    Location:173242
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam14513
    Location:39169
    DAG_kinase_N; Diacylglycerol kinase N-terminus
    cd20890
    Location:329390
    C1_DGKalpha_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase alpha (DAG kinase alpha) and similar proteins
    cl00040
    Location:260320
    C1; protein kinase C conserved region 1 (C1 domain) superfamily
  8. XM_017313790.2XP_017169279.2  diacylglycerol kinase alpha isoform X8

    UniProtKB/TrEMBL
    R4I3X7
    Conserved Domains (4) summary
    cd00051
    Location:150219
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam14513
    Location:39146
    DAG_kinase_N; Diacylglycerol kinase N-terminus
    cd20890
    Location:306367
    C1_DGKalpha_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase alpha (DAG kinase alpha) and similar proteins
    cl00040
    Location:237297
    C1; protein kinase C conserved region 1 (C1 domain) superfamily
  9. XM_011243363.2XP_011241665.2  diacylglycerol kinase alpha isoform X7

    UniProtKB/TrEMBL
    R4I3X7
    Conserved Domains (4) summary
    cd00051
    Location:173242
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam14513
    Location:39169
    DAG_kinase_N; Diacylglycerol kinase N-terminus
    cd20890
    Location:329390
    C1_DGKalpha_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase alpha (DAG kinase alpha) and similar proteins
    cl00040
    Location:260320
    C1; protein kinase C conserved region 1 (C1 domain) superfamily

RNA

  1. XR_003948587.2 RNA Sequence

    Related
    ENSMUST00000219834.2
  2. XR_001779451.2 RNA Sequence

  3. XR_380362.4 RNA Sequence

  4. XR_001779449.2 RNA Sequence