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zgc:172136 uncharacterized LOC131552830 [ Onychostoma macrolepis ]

Gene ID: 131552830, updated on 28-Mar-2024

Summary

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Gene symbol
zgc:172136
Gene description
uncharacterized LOC131552830
Locus tag
G5714_013696
Gene type
protein coding
RefSeq status
MODEL
Organism
Onychostoma macrolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Acrossocheilinae; Onychostoma
Orthologs
zebrafish all
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Genomic context

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See zgc:172136 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_08 current ASM1243209v1 (GCF_012432095.1) 13 NC_081167.1 (24578157..24595498)

Chromosome 13 - NC_081167.1Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(XIX) chain Neighboring gene collagen, type IX, alpha 1b Neighboring gene family with sequence similarity 135 member A Neighboring gene 5-hydroxytryptamine receptor 1D Neighboring gene TAR (HIV-1) RNA binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_081167.1 Chromosome 13 Reference ASM1243209v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of hippo signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic side of apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FERM domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_012432095.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1243209v1 Primary Assembly

Genomic

  1. NC_081167.1 Reference ASM1243209v1 Primary Assembly

    Range
    24578157..24595498
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058796972.1 → XP_058652955.1  FERM domain-containing protein 6

    UniProtKB/TrEMBL
    A0A7J6CG17
Nucleotide Protein
Heading Accession and Version

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