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LOC132760586 centrosome and spindle pole associated protein 1-like [ Ruditapes philippinarum (Manila clam) ]

Gene ID: 132760586, updated on 30-Nov-2023

Summary

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Gene symbol
LOC132760586
Gene description
centrosome and spindle pole associated protein 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ruditapes philippinarum
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Heteroconchia; Euheterodonta; Imparidentia; Neoheterodontei; Venerida; Veneroidea; Veneridae; Ruditapes
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC132760586 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_10 current ASM2657151v2 (GCF_026571515.1) Unplaced Scaffold NW_026860555.1 (1852..13123)

NW_026860555.1Genomic Context describing neighboring genes Neighboring gene prolactin regulatory element-binding protein-like Neighboring gene NAD-dependent protein deacetylase Sirt6-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026860555 Unplaced Scaffold Reference ASM2657151v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo assembly of the Manila clam Ruditapes philippinarum transcriptome provides new insights into expression bias, mitochondrial doubly uniparental inheritance and sex determination. Ghiselli F, et al. Mol Biol Evol, 2012 Feb. PMID 21976711, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle pole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosome and spindle pole associated protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026571515.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2657151v2 Primary Assembly

Genomic

  1. NW_026860555.1 Reference ASM2657151v2 Primary Assembly

    Range
    1852..13123
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060752588.1 → XP_060608571.1  centrosome and spindle pole associated protein 1-like

Nucleotide Protein
Heading Accession and Version

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