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ARHGEF1 Rho guanine nucleotide exchange factor 1 [ Rhea pennata ]

Gene ID: 134152975, updated on 26-Jun-2024

Summary

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Gene symbol
ARHGEF1
Gene description
Rho guanine nucleotide exchange factor 1
See related
EnsemblRapid:ENSPPEG00010005872
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhea pennata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Rheiformes; Rheidae; Rhea
Orthologs
human mouse all
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Genomic context

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See ARHGEF1 in Genome Data Viewer
Location:
chromosome: 36
Exon count:
35
Annotation release Status Assembly Chr Location
RS_2023_12 current bPtePen1.pri (GCF_028389875.1) 36 NC_084698.1 (123814..139385)

Chromosome 36 - NC_084698.1Genomic Context describing neighboring genes Neighboring gene toll-like receptor 13 Neighboring gene CD79a molecule Neighboring gene ETS repressor factor like Neighboring gene Rab acceptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084698.1 Chromosome 36 Reference bPtePen1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho guanine nucleotide exchange factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028389875.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bPtePen1.pri Primary Assembly

Genomic

  1. NC_084698.1 Reference bPtePen1.pri Primary Assembly

    Range
    123814..139385
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062598747.1 → XP_062454731.1  rho guanine nucleotide exchange factor 1 isoform X1

  2. XM_062598750.1 → XP_062454734.1  rho guanine nucleotide exchange factor 1 isoform X3

    Related
    ENSPPEP00010007837.1, ENSPPET00010008369.1

  3. XM_062598751.1 → XP_062454735.1  rho guanine nucleotide exchange factor 1 isoform X4

    Related
    ENSPPEP00010007847.1, ENSPPET00010008379.1

  4. XM_062598749.1 → XP_062454733.1  rho guanine nucleotide exchange factor 1 isoform X2

  5. XM_062598752.1 → XP_062454736.1  rho guanine nucleotide exchange factor 1 isoform X5

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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