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Dok1 docking protein 1 [ Mus musculus (house mouse) ]

Gene ID: 13448, updated on 27-Nov-2024

Summary

Official Symbol
Dok1provided by MGI
Official Full Name
docking protein 1provided by MGI
Primary source
MGI:MGI:893587
See related
Ensembl:ENSMUSG00000068335 AllianceGenome:MGI:893587
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
p62DOK
Summary
Acts upstream of or within Ras protein signal transduction; cell surface receptor protein tyrosine kinase signaling pathway; and macrophage colony-stimulating factor signaling pathway. Predicted to be located in cytosol and nucleus. Predicted to be active in cytoplasm. Is expressed in central nervous system and retina. Orthologous to human DOK1 (docking protein 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in liver E14.5 (RPKM 9.9), spleen adult (RPKM 9.8) and 25 other tissues See more
Orthologs
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Genomic context

See Dok1 in Genome Data Viewer
Location:
6 C3; 6 35.94 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (83007915..83010448, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (83030932..83033495, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene meiosis 1 associated protein Neighboring gene predicted gene, 53290 Neighboring gene predicted gene, 32644 Neighboring gene STARR-seq mESC enhancer starr_16455 Neighboring gene STARR-positive B cell enhancer ABC_E2791 Neighboring gene lysyl oxidase-like 3 Neighboring gene STARR-positive B cell enhancer ABC_E9275 Neighboring gene microRNA 7040 Neighboring gene HtrA serine peptidase 2 Neighboring gene ancient ubiquitous protein 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 
  • Targeted (2)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
docking protein 1
Names
downstream of tyrosine kinase 1
p62(dok)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001409625.1NP_001396554.1  docking protein 1 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC104324, AC158652
  2. NM_001409626.1NP_001396555.1  docking protein 1 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC104324, AC158652
  3. NM_010070.5NP_034200.4  docking protein 1 isoform 1

    See identical proteins and their annotated locations for NP_034200.4

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longest isoform (1).
    Source sequence(s)
    AC104324, AC158652
    Consensus CDS
    CCDS20265.1
    UniProtKB/Swiss-Prot
    P97465, Q9R213
    UniProtKB/TrEMBL
    Q3UWF9
    Related
    ENSMUSP00000087079.6, ENSMUST00000089651.6
    Conserved Domains (3) summary
    cd01203
    Location:151253
    PTB_DOK1_DOK2_DOK3; Downstream of tyrosine kinase 1, 2, and 3 proteins phosphotyrosine-binding domain (PTBi)
    pfam00169
    Location:5116
    PH; PH domain
    cl17171
    Location:6119
    PH-like; Pleckstrin homology-like domain

RNA

  1. NR_176878.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC104324, AC158652
    Related
    ENSMUST00000149918.2
  2. NR_176879.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC104324, AC158652
  3. NR_176880.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC104324, AC158652

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    83007915..83010448 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)