U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LMXM_11_1000 putative pyruvate phosphate dikinase [ Leishmania mexicana MHOM/GT/2001/U1103 ]

Gene ID: 13454805, updated on 30-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
LMXM_11_1000
Gene description
putative pyruvate phosphate dikinase
Locus tag
LMXM_11_1000
Gene type
protein coding
RNA name
putative pyruvate phosphate dikinase
RefSeq status
PROVISIONAL
Organism
Leishmania mexicana MHOM/GT/2001/U1103 (strain: MHOM/GT/2001/U1103)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
Orthologs
Leishmania major all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LMXM_11_1000 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
1
Sequence:
Chromosome: 11; NC_018315.1 (388076..390820)

Chromosome 11 - NC_018315.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene adaptin-related protein-like protein Neighboring gene inositol-1,4,5-trisphosphate (IP3) 5-phosphatase,putative Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_018315.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Gluconeogenesis in Leishmania mexicana: contribution of glycerol kinase, phosphoenolpyruvate carboxykinase, and pyruvate phosphate dikinase. Rodriguez-Contreras D, et al. J Biol Chem, 2014 Nov 21. PMID 25288791, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyruvate, phosphate dikinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pyruvate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
putative pyruvate phosphate dikinase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_018315.1 Reference assembly

    Range
    388076..390820
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003873022.1 → XP_003873071.1  putative pyruvate phosphate dikinase [Leishmania mexicana MHOM/GT/2001/U1103]

    See identical proteins and their annotated locations for XP_003873071.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E9ANP4
    Conserved Domains (4) summary
    PRK09279
    Location:2 → 883
    PRK09279; pyruvate phosphate dikinase; Provisional
    pfam00391
    Location:450 → 529
    PEP-utilizers; PEP-utilizing enzyme, mobile domain
    pfam01326
    Location:25 → 385
    PPDK_N; Pyruvate phosphate dikinase, PEP/pyruvate binding domain
    cl21481
    Location:543 → 883
    malate_synt; Malate synthase catalyzes the Claisen condensation of glyoxylate and acetyl-CoA to malyl-CoA , which hydrolyzes to malate and CoA. This reaction is part of the glyoxylate cycle, which allows certain organisms, like plants and fungi, to derive their ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases