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LMXM_13_1040 serine peptidase, clan SB, family S8-like protein [ Leishmania mexicana MHOM/GT/2001/U1103 ]

Gene ID: 13455145, updated on 30-Oct-2024

Summary

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Gene symbol
LMXM_13_1040
Gene description
serine peptidase, clan SB, family S8-like protein
Locus tag
LMXM_13_1040
Gene type
protein coding
RNA name
serine peptidase, clan SB, family S8-like protein
RefSeq status
PROVISIONAL
Organism
Leishmania mexicana MHOM/GT/2001/U1103 (strain: MHOM/GT/2001/U1103)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
Orthologs
Leishmania major all
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Genomic context

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See LMXM_13_1040 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
1
Sequence:
Chromosome: 13; NC_018317.1 (326740..332025, complement)

Chromosome 13 - NC_018317.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein, unknown function Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene putative NADH-cytochrome b5 reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_018317.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
serine peptidase, clan SB, family S8-like protein
subtilisin-like serine peptidase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_018317.1 Reference assembly

    Range
    326740..332025 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003873256.1 → XP_003873305.1  serine peptidase, clan SB, family S8-like protein [Leishmania mexicana MHOM/GT/2001/U1103]

    See identical proteins and their annotated locations for XP_003873305.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E9APC8
    Conserved Domains (1) summary
    cl10459
    Location:86 → 409
    Peptidases_S8_S53; Peptidase domain in the S8 and S53 families
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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