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LMXM_13_0090 metallo-peptidase, Clan MA(E), family 32 [ Leishmania mexicana MHOM/GT/2001/U1103 ]

Gene ID: 13455164, updated on 30-Oct-2024

Summary

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Gene symbol
LMXM_13_0090
Gene description
metallo-peptidase, Clan MA(E), family 32
Locus tag
LMXM_13_0090
Gene type
protein coding
RNA name
metallo-peptidase, Clan MA(E), family 32
RefSeq status
PROVISIONAL
Organism
Leishmania mexicana MHOM/GT/2001/U1103 (strain: MHOM/GT/2001/U1103)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
Orthologs
Leishmania major all
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Genomic context

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See LMXM_13_0090 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
1
Sequence:
Chromosome: 13; NC_018317.1 (23895..25406, complement)

Chromosome 13 - NC_018317.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein, unknown function Neighboring gene mitochondrial DNA polymerase I protein B,putative Neighboring gene hypothetical protein, unknown function Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_018317.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
metallo-peptidase, Clan MA(E), family 32
putative carboxypeptidase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_018317.1 Reference assembly

    Range
    23895..25406 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003873171.1 → XP_003873220.1  metallo-peptidase, Clan MA(E), family 32 [Leishmania mexicana MHOM/GT/2001/U1103]

    See identical proteins and their annotated locations for XP_003873220.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E9AP43
    Conserved Domains (1) summary
    cd06460
    Location:12 → 499
    M32_Taq; Peptidase family M32 includes thermostable carboxypeptidases TaqCP and PfuCP
Nucleotide Protein
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