U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NDAI0G04420 tyrosine protein phosphatase YVH1 [ Naumovozyma dairenensis CBS 421 ]

Gene ID: 13927092, updated on 6-Dec-2024

Summary

Go to the top of the page Help
Gene symbol
NDAI0G04420
Gene description
tyrosine protein phosphatase YVH1
Locus tag
NDAI_0G04420
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Naumovozyma dairenensis CBS 421 (strain: type strain:CBS 421)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Naumovozyma
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See NDAI0G04420 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
1
Sequence:
Chromosome: 7; NC_016485.2 (1056624..1057808)

Chromosome 7 - NC_016485.2Genomic Context describing neighboring genes Neighboring gene citrate (Si)-synthase CIT2 Neighboring gene tRNA-Pro Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_016485.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine/serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tyrosine protein phosphatase YVH1
XP_003980103.1
  • similar to Saccharomyces cerevisiae YVH1 (YIR026C); ancestral locus Anc_2.660

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016485.2 Reference assembly

    Range
    1056624..1057808
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003980054.1 → XP_003980103.1  tyrosine protein phosphatase YVH1 [Naumovozyma dairenensis CBS 421]

    See identical proteins and their annotated locations for XP_003980103.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    J7RT92
    Conserved Domains (2) summary
    COG2453
    Location:37 → 218
    CDC14; Protein-tyrosine phosphatase [Signal transduction mechanisms]
    cd00127
    Location:42 → 197
    DSPc; Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases