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CACUL1 CDK2 associated cullin domain 1 [ Homo sapiens (human) ]

Gene ID: 143384, updated on 27-Nov-2024

Summary

Official Symbol
CACUL1provided by HGNC
Official Full Name
CDK2 associated cullin domain 1provided by HGNC
Primary source
HGNC:HGNC:23727
See related
Ensembl:ENSG00000151893 MIM:618764; AllianceGenome:HGNC:23727
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CAC1; C10orf46
Summary
Enables protein kinase binding activity. Involved in G1/S transition of mitotic cell cycle; positive regulation of cell population proliferation; and positive regulation of protein kinase activity. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in testis (RPKM 11.0), bone marrow (RPKM 9.1) and 25 other tissues See more
Orthologs
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Genomic context

See CACUL1 in Genome Data Viewer
Location:
10q26.11
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (118676411..118754970, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (119571544..119650196, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (120435923..120514482, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:120354119-120354927 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:120354928-120355736 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:120355737-120356545 Neighboring gene prolactin releasing hormone receptor Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:120394958-120395458 Neighboring gene TOMM22 pseudogene 5 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4103 Neighboring gene Sharpr-MPRA regulatory region 11808 Neighboring gene uncharacterized LOC107987151 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr10:120554781-120555336 Neighboring gene long intergenic non-protein coding RNA 3036 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:120568144-120568912 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:120568913-120569681 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:120602961-120603462 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:120603463-120603962 Neighboring gene Sharpr-MPRA regulatory region 10884 Neighboring gene ribosomal protein L17 pseudogene 36

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • FLJ40409, MGC33215

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein kinase binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein kinase binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
CDK2-associated and cullin domain-containing protein 1
Names
Cdk-Associated Cullin1
cdk-associated cullin 1
cullin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_153810.5NP_722517.3  CDK2-associated and cullin domain-containing protein 1

    See identical proteins and their annotated locations for NP_722517.3

    Status: VALIDATED

    Source sequence(s)
    AJ544771, AL139407, AY743663, BU623607
    Consensus CDS
    CCDS41570.1
    UniProtKB/Swiss-Prot
    Q5XPL7, Q86Y37, Q8IY11, Q8N7S4
    Related
    ENSP00000358147.2, ENST00000369151.8
    Conserved Domains (1) summary
    pfam00888
    Location:138256
    Cullin; Cullin family

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    118676411..118754970 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    119571544..119650196 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)