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ORF3b ORF3b protein [ SARS coronavirus Tor2 ]

Gene ID: 1489670, updated on 7-Jul-2024

Summary

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Gene symbol
ORF3b
Gene description
ORF3b protein
Locus tag
sars3b
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
SARS coronavirus Tor2 (isolate: Tor2, nat-host: Homo sapiens; patient #2 with severe acute respiratory syndrome (SARS))
Lineage
Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus
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Genomic context

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Sequence:
NC_004718.3 (25689..26153)

NC_004718.3Genomic Context describing neighboring genes Neighboring gene ORF1a polyprotein;ORF1ab polyprotein Neighboring gene spike glycoprotein Neighboring gene ORF3a protein Neighboring gene ORF7a protein Neighboring gene ORF7b protein Neighboring gene ORF6 protein Neighboring gene small envelope protein Neighboring gene membrane glycoprotein M

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004718.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. SARS coronavirus 3b accessory protein modulates transcriptional activity of RUNX1b. Varshney B, et al. PLoS One, 2012. PMID 22253733, Free PMC Article
  2. Interactions among SARS-CoV accessory proteins revealed by bimolecular fluorescence complementation assay. Kong J, et al. Acta Pharm Sin B, 2015 Sep. PMID 26579480, Free PMC Article
  3. Genome-wide analysis of protein-protein interactions and involvement of viral proteins in SARS-CoV replication. Pan J, et al. PLoS One, 2008 Oct 1. PMID 18827877, Free PMC Article
  4. Analysis of intraviral protein-protein interactions of the SARS coronavirus ORFeome. von Brunn A, et al. PLoS One, 2007 May 23. PMID 17520018, Free PMC Article
  5. Analysis of multimerization of the SARS coronavirus nucleocapsid protein. He R, et al. Biochem Biophys Res Commun, 2004 Apr 2. PMID 15020242, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. These results unveil a novel interaction of SARS-CoV 3b with the host factor, RUNX1b.
    Title: SARS coronavirus 3b accessory protein modulates transcriptional activity of RUNX1b.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General protein information

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Preferred Names
ORF3b protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004718.3 Reference assembly

    Range
    25689..26153
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009825053.1 ORF3b protein [SARS coronavirus Tor2]

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P59633, Q7TFA9, Q80BV4
    UniProtKB/TrEMBL
    A0A3G5BIZ2, B8Q8Q5, B8Q8R6, B8Q8S8, C4P6Q9, D2E1D4, D2E1E9, D2E223, D2E252, D2E267, D2E2F4, D2E2T6, D3KDM7, J9T0L3, Q19QW8, Q1EFN0, Q1EFP3, Q1T6X4, Q3S2C3, Q3ZTC3, Q3ZTD8, Q4JDQ2, Q5DIC3, Q5Y185, Q692E2, Q6GYQ9, Q6JH36, Q6JH44, Q6R7Y4, Q6RCW3, Q6RCX4, Q6RCY5, Q6RCZ6, Q6RD07, Q6RD18, Q6RD29, Q6RD40, Q6RD51, Q6RD62, Q6S8D5, Q6VA76, Q6VA87, Q6VA98, Q6WGN1
    Conserved Domains (1) summary
    cl40696
    Location:1 → 153
    SARS-CoV_ORF3b; accessory protein ORF3b of severe acute respiratory syndrome-associated coronavirus
Nucleotide Protein
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