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ACA1_364690 EF hand domain containing protein [ Acanthamoeba castellanii str. Neff ]

Gene ID: 14914675, updated on 17-May-2024

Summary

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Gene symbol
ACA1_364690
Gene description
EF hand domain containing protein
Locus tag
ACA1_364690
See related
AmoebaDB:ACA1_364690; VEuPathDB:ACA1_364690
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Acanthamoeba castellanii str. Neff (strain: Neff, culture-collection: ATCC:30010)
Lineage
Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba
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Genomic context

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See ACA1_364690 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_004457343.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene BTB/POZ domain containing protein Neighboring gene Ras family protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004457343.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling. Clarke M, et al. Genome Biol, 2013 Feb 1. PMID 23375108, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EF hand domain containing protein
XP_004335954.1
  • encoded by transcript ACA1_364690A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_004457343.1 Reference assembly

    Range
    177502..178384
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004335906.1 → XP_004335954.1  EF hand domain containing protein [Acanthamoeba castellanii str. Neff]

    See identical proteins and their annotated locations for XP_004335954.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    L8GP75
    Conserved Domains (3) summary
    pfam13405
    Location:132 → 160
    EF-hand_6; EF-hand domain
    pfam13499
    Location:132 → 192
    EF-hand_7; EF-hand domain pair
    cl08302
    Location:17 → 72
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
Nucleotide Protein
Heading Accession and Version

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