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Hmgb1-rs18 high mobility group box 1, related sequence 18 [ Mus musculus (house mouse) ]

Gene ID: 15298, updated on 17-Aug-2024

Summary

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Official Symbol
Hmgb1-rs18provided by MGI
Official Full Name
high mobility group box 1, related sequence 18provided by MGI
Primary source
MGI:MGI:104763
See related
AllianceGenome:MGI:104763
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Hmg1-rs18
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Genomic context

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See Hmgb1-rs18 in Genome Data Viewer
Location:
4 C1; 4 34.92 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (67436790..67437231, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (67518553..67518994, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_10482 Neighboring gene STARR-seq mESC enhancer starr_10483 Neighboring gene STARR-seq mESC enhancer starr_10484 Neighboring gene STARR-positive B cell enhancer ABC_E4634 Neighboring gene predicted gene 11220 Neighboring gene VISTA enhancer mm279 Neighboring gene STARR-seq mESC enhancer starr_10485 Neighboring gene STARR-seq mESC enhancer starr_10486 Neighboring gene STARR-seq mESC enhancer starr_10487 Neighboring gene STARR-seq mESC enhancer starr_10488 Neighboring gene toll-like receptor 4 Neighboring gene STARR-seq mESC enhancer starr_10489 Neighboring gene STARR-seq mESC enhancer starr_10490 Neighboring gene STARR-seq mESC enhancer starr_10491 Neighboring gene STARR-seq mESC enhancer starr_10492 Neighboring gene ribosomal protein S2 pseudogene Neighboring gene predicted gene, 23738

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The mouse gene coding for high mobility group 1 protein (HMG1). Ferrari S, et al. J Biol Chem, 1994 Nov 18. PMID 7961836

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • high mobility group protein 1, related sequence 18

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_001394.4 

    Range
    101..542
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    67436790..67437231 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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