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Klra13-ps killer cell lectin-like receptor subfamily A, member 13, pseudogene [ Mus musculus (house mouse) ]

Gene ID: 16631, updated on 17-Aug-2024

Summary

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Official Symbol
Klra13-psprovided by MGI
Official Full Name
killer cell lectin-like receptor subfamily A, member 13, pseudogeneprovided by MGI
Primary source
MGI:MGI:1321090
See related
Ensembl:ENSMUSG00000030178 AllianceGenome:MGI:1321090
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ly49M; Klra13
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Klra13-ps in Genome Data Viewer
Location:
6 F3; 6 63.44 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (130268124..130283395, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (130291161..130306432, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene killer cell lectin-like receptor, subfamily A, member 7 Neighboring gene killer cell lectin-like receptor subfamily A, member 10 Neighboring gene predicted gene, 24072 Neighboring gene killer cell lectin-like receptor, subfamily A, member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Direct sequence comparison of two divergent class I MHC natural killer cell receptor haplotypes. Makrigiannis AP, et al. Genes Immun, 2005 Mar. PMID 15674375
  2. Ly-49W, an activating receptor of nonobese diabetic mice with close homology to the inhibitory receptor Ly-49G, recognizes H-2D(k) and H-2D(d). Silver ET, et al. J Immunol, 2001 Feb 15. PMID 11160290
  3. Localization of five new Ly49 genes, including three closely related to Ly49c. McQueen KL, et al. Immunogenetics, 1998 Aug. PMID 9683662
  4. Control of Viral Infection by Natural Killer Cell Inhibitory Receptors. Parikh BA, et al. Cell Rep, 2020 Jul 28. PMID 32726632, Free PMC Article
  5. Class I MHC-binding characteristics of the 129/J Ly49 repertoire. Makrigiannis AP, et al. J Immunol, 2001 Apr 15. PMID 11290784

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

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Markers

Clone Names

  • MGC123449

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033451.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC161448
    Related
    ENSMUST00000125813.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    130268124..130283395 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_010647.2: Suppressed sequence

    Description
    NM_010647.2: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene in the reference C57BL/6J strain. This gene encodes a protein in other mouse strains.
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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