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Krtap11-1 keratin associated protein 11-1 [ Mus musculus (house mouse) ]

Gene ID: 16693, updated on 4-Jan-2025

Summary

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Official Symbol
Krtap11-1provided by MGI
Official Full Name
keratin associated protein 11-1provided by MGI
Primary source
MGI:MGI:99447
See related
Ensembl:ENSMUSG00000091212 AllianceGenome:MGI:99447
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Hacl1; PRED29; KAP11.1
Summary
Is expressed in several structures, including alimentary system; genitourinary system; nervous system; sensory organ; and skin. Orthologous to human KRTAP11-1 (keratin associated protein 11-1). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
human all
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Genomic context

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See Krtap11-1 in Genome Data Viewer
Location:
16 C3.3; 16 51.42 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (89367064..89368071, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (89570176..89571183, complement)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene keratin associated protein 8-1 Neighboring gene keratin associated protein 7-1 Neighboring gene STARR-seq mESC enhancer starr_41421 Neighboring gene STARR-seq mESC enhancer starr_41422 Neighboring gene STARR-seq mESC enhancer starr_41423 Neighboring gene cyclin G1 pseudogene Neighboring gene predicted gene, 35500 Neighboring gene STARR-seq mESC enhancer starr_41424 Neighboring gene STARR-seq mESC enhancer starr_41425 Neighboring gene STARR-seq mESC enhancer starr_41426

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Isolation and characterization of a novel hair follicle-specific gene, Hacl-1. Huh N, et al. J Invest Dermatol, 1994 May. PMID 7513738
  2. Krtap16, characterization of a new hair keratin-associated protein (KAP) gene complex on mouse chromosome 16 and evidence for regulation by Hoxc13. Pruett ND, et al. J Biol Chem, 2004 Dec 3. PMID 15385554
  3. Molecular evolution of the keratin associated protein gene family in mammals, role in the evolution of mammalian hair. Wu DD, et al. BMC Evol Biol, 2008 Aug 23. PMID 18721477, Free PMC Article
  4. A gene expression map of human chromosome 21 orthologues in the mouse. Gitton Y, et al. Nature, 2002 Dec 5. PMID 12466855
  5. Human chromosome 21 gene expression atlas in the mouse. Reymond A, et al. Nature, 2002 Dec 5. PMID 12466854

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
keratin associated protein 11-1
Names
keratin-associated protein 11.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001113406.1 → NP_001106877.1  keratin associated protein 11-1

    Status: VALIDATED

    Source sequence(s)
    AC140433
    Consensus CDS
    CCDS49903.1
    UniProtKB/TrEMBL
    E9Q2E9
    Related
    ENSMUSP00000129948.2, ENSMUST00000171542.2
    Conserved Domains (1) summary
    pfam05287
    Location:1 → 165
    PMG; PMG protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    89367064..89368071 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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