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Blcap BLCAP, apoptosis inducing factor [ Rattus norvegicus (Norway rat) ]

Gene ID: 171113, updated on 4-Jan-2025

Summary

Official Symbol
Blcapprovided by RGD
Official Full Name
BLCAP, apoptosis inducing factorprovided by RGD
Primary source
RGD:621666
See related
EnsemblRapid:ENSRNOG00000024437 AllianceGenome:RGD:621666
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to be involved in apoptotic nuclear changes. Predicted to be located in cytoplasm; membrane; and nucleus. Orthologous to human BLCAP (BLCAP apoptosis inducing factor). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See Blcap in Genome Data Viewer
Location:
3q42
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (166642676..166656924, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (146222699..146232859, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (154040165..154042096, complement)

Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134486197 Neighboring gene SRC proto-oncogene, non-receptor tyrosine kinase Neighboring gene uncharacterized LOC134486196 Neighboring gene neuronatin Neighboring gene uncharacterized LOC108350620 Neighboring gene uncharacterized LOC120101772

Genomic regions, transcripts, and products

General gene information

Markers

Clone Names

  • MGC105330

Gene Ontology Provided by RGD

Process Evidence Code Pubs
involved_in apoptotic nuclear changes ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
apoptosis inducing factor BLCAP; bladder cancer-associated protein
Names
bc10
bladder cancer 10 kDa protein
bladder cancer associated protein homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_133582.3NP_598266.1  apoptosis inducing factor BLCAP

    See identical proteins and their annotated locations for NP_598266.1

    Status: VALIDATED

    Source sequence(s)
    AB071598, BC087661, BU671743
    UniProtKB/Swiss-Prot
    P62950
    UniProtKB/TrEMBL
    A6JWT5
    Related
    ENSRNOP00000031525.3, ENSRNOT00000033525.7
    Conserved Domains (1) summary
    pfam06726
    Location:165
    BC10; Bladder cancer-related protein BC10

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086021.1 Reference GRCr8

    Range
    166642676..166656924 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063283041.1XP_063139111.1  bladder cancer-associated protein isoform X1

    UniProtKB/Swiss-Prot
    P62950
    UniProtKB/TrEMBL
    A6JWT5