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Y18H1A.2 CBF1-interacting co-repressor CIR N-terminal domain-containing protein;Cir_N domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 171662, updated on 4-Jan-2025

Summary

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Official Symbol
Y18H1A.2
Official Full Name
CBF1-interacting co-repressor CIR N-terminal domain-containing protein;Cir_N domain-containing protein
Primary source
WormBase:WBGene00021208
Locus tag
CELE_Y18H1A.2
See related
AllianceGenome:WB:WBGene00021208
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Orthologous to human LENG1 (leukocyte receptor cluster member 1). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See Y18H1A.2 in Genome Data Viewer
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003279.8 (694976..698324, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Tyrosine-protein phosphatase domain-containing protein Neighboring gene Histidine phosphatase family protein Neighboring gene Rap-GAP domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene ATP-dependent DNA helicase;ATP-dependent DNA helicase PIF1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
  2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
CBF1-interacting co-repressor CIR N-terminal domain-containing protein;Cir_N domain-containing protein
NP_001355497.1
  • Confirmed by transcript evidence
NP_490771.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    694976..698324 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001368447.4 → NP_001355497.1  Cir_N domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A3P6N6A5

  2. NM_058370.6 → NP_490771.2  CBF1-interacting co-repressor CIR N-terminal domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A3P6MY32
Nucleotide Protein
Heading Accession and Version

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