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F53F10.1 Coiled-coil domain-containing protein 102A [ Caenorhabditis elegans ]

Gene ID: 171959, updated on 4-Jan-2025

Summary

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Official Symbol
F53F10.1
Official Full Name
Coiled-coil domain-containing protein 102A
Primary source
WormBase:WBGene00018763
Locus tag
CELE_F53F10.1
See related
AllianceGenome:WB:WBGene00018763
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Located in mitochondrion. Is expressed in body wall musculature. Orthologous to human CCDC102B (coiled-coil domain containing 102B). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See F53F10.1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
5
Sequence:
Chromosome: I; NC_003279.8 (3834115..3837807, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene putative mitochondrial pyruvate carrier 2 Neighboring gene Transmembrane protein 234 homolog Neighboring gene ncRNA Neighboring gene AntiZyme INhibitor;Antizyme inhibitor 1;BRCA1 Neighboring gene Serine/threonine-protein phosphatase PP1-delta Neighboring gene F-box domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Determining the sub-cellular localization of proteins within Caenorhabditis elegans body wall muscle. Meissner B, et al. PLoS One, 2011. PMID 21611156, Free PMC Article
  2. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
  3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion HDA PubMed 

General protein information

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Preferred Names
Coiled-coil domain-containing protein 102A
NP_491236.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    3834115..3837807 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_058835.7 → NP_491236.1  Coiled-coil domain-containing protein 102A [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_491236.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O01580
Nucleotide Protein
Heading Accession and Version

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