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suco-1 SUN domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 172011, updated on 4-Jan-2025

Summary

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Official Symbol
suco-1
Official Full Name
SUN domain-containing protein
Primary source
WormBase:WBGene00020031
Locus tag
CELE_R12E2.2
See related
AllianceGenome:WB:WBGene00020031
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be active in cytoplasm and membrane. Is expressed widely. Orthologous to human SUCO (SUN domain containing ossification factor). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See suco-1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
9
Sequence:
Chromosome: I; NC_003279.8 (4178812..4182129)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene MPN domain-containing protein Neighboring gene ncRNA Neighboring gene MIR domain-containing protein Neighboring gene BTB domain-containing protein Neighboring gene Piwi domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Caenorhabditis elegans gene lin-44 controls the polarity of asymmetric cell divisions. Herman MA, et al. Development, 1994 May. PMID 8026318
  2. Essential genes in the hDf6 region of chromosome I in Caenorhabditis elegans. Howell AM, et al. Genetics, 1990 Nov. PMID 2249758, Free PMC Article
  3. Isolated C. elegans germ nuclei exhibit distinct genomic profiles of histone modification and gene expression. Han M, et al. BMC Genomics, 2019 Jun 17. PMID 31208332, Free PMC Article
  4. Identification of Caenorhabditis elegans genes regulating longevity using enhanced RNAi-sensitive strains. Samuelson AV, et al. Cold Spring Harb Symp Quant Biol, 2007. PMID 18419309
  5. Allelic ratios and the mutational landscape reveal biologically significant heterozygous SNVs. Chu JS, et al. Genetics, 2012 Apr. PMID 22267497, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
SUN domain-containing protein
NP_001370471.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    4178812..4182129
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001382881.2 → NP_001370471.1  SUN domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    O61794
    Conserved Domains (2) summary
    PRK11633
    Location:424 → 471
    PRK11633; cell division protein DedD; Provisional
    pfam07738
    Location:144 → 272
    Sad1_UNC; Sad1 / UNC-like C-terminal
Nucleotide Protein
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