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cps-6 Endonuclease G, mitochondrial [ Caenorhabditis elegans ]

Gene ID: 172045, updated on 4-Jan-2025

Summary

Official Symbol
cps-6
Official Full Name
Endonuclease G, mitochondrial
Primary source
WormBase:WBGene00000787
Locus tag
CELE_C41D11.8
See related
AllianceGenome:WB:WBGene00000787
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Enables endonuclease activity; protein homodimerization activity; and sequence-specific DNA binding activity. Involved in RNA catabolic process and apoptotic DNA fragmentation. Located in mitochondrion. Orthologous to human ENDOG (endonuclease G). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

See cps-6 in Genome Data Viewer
Location:
chromosome: I
Exon count:
5
Sequence:
Chromosome: I; NC_003279.8 (4446586..4448461, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Cysteine/serine-rich nuclear protein N-terminal domain-containing protein Neighboring gene Eukaryotic translation initiation factor 3 subunit H Neighboring gene TM2 domain-containing protein C41D11.9 Neighboring gene Protein cmt-1

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables DNA endonuclease activity IDA
Inferred from Direct Assay
more info
PubMed 
enables RNA endonuclease activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables RNA endonuclease activity IDA
Inferred from Direct Assay
more info
PubMed 
enables double-stranded DNA endonuclease activity IDA
Inferred from Direct Assay
more info
PubMed 
enables endonuclease activity IDA
Inferred from Direct Assay
more info
PubMed 
enables endonuclease activity IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 
enables protein homodimerization activity IPI
Inferred from Physical Interaction
more info
PubMed 
enables sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables single-stranded DNA endodeoxyribonuclease activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in DNA catabolic process IDA
Inferred from Direct Assay
more info
PubMed 
involved_in RNA catabolic process IDA
Inferred from Direct Assay
more info
PubMed 
involved_in apoptotic DNA fragmentation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in apoptotic DNA fragmentation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in apoptotic DNA fragmentation IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in apoptotic DNA fragmentation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in mitochondrial inner membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
Endonuclease G, mitochondrial
NP_491371.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    4446586..4448461 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_058970.6NP_491371.1  Endonuclease G, mitochondrial [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_491371.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q95NM6
    Conserved Domains (2) summary
    smart00477
    Location:83293
    NUC; DNA/RNA non-specific endonuclease
    COG1864
    Location:10308
    NUC1; DNA/RNA endonuclease G, NUC1 [Nucleotide transport and metabolism]