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mfsd-13.1 Major Facilitator Superfamily Domain containing homolog [ Caenorhabditis elegans ]

Gene ID: 172111, updated on 9-Dec-2024

Summary

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Official Symbol
mfsd-13.1
Official Full Name
Major Facilitator Superfamily Domain containing homolog
Primary source
WormBase:WBGene00017886
Locus tag
CELE_F28B3.5
See related
AllianceGenome:WB:WBGene00017886
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Orthologous to human MFSD13A (major facilitator superfamily domain containing 13A). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See mfsd-13.1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
5
Sequence:
Chromosome: I; NC_003279.8 (4926635..4928840)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Transmembrane protein 230 Neighboring gene Importin N-terminal domain-containing protein Neighboring gene Phospholipid/glycerol acyltransferase domain-containing protein Neighboring gene AMP-dependent synthetase/ligase domain-containing protein;DMAP1-binding domain-containing protein Neighboring gene Chloride channel protein CLC-d Neighboring gene Uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Defect-buffering cellular plasticity increases robustness of metazoan embryogenesis. Xiao L, et al. Cell Syst, 2022 Aug 17. PMID 35882226
  2. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
  3. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Major Facilitator Superfamily Domain containing homolog
NP_001360002.1
  • Confirmed by transcript evidence;
    Product from WormBase gene class mfsd
NP_491478.1
  • Confirmed by transcript evidence;
    Product from WormBase gene class mfsd

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    4926635..4928840
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001372665.1 → NP_001360002.1  Major Facilitator Superfamily Domain containing homolog [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q86NJ1
    Conserved Domains (1) summary
    cl28910
    Location:9 → 190
    MFS; Major Facilitator Superfamily

  2. NM_059077.6 → NP_491478.1  Major Facilitator Superfamily Domain containing homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_491478.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KZU5
    Conserved Domains (1) summary
    pfam13347
    Location:4 → 451
    MFS_2; MFS/sugar transport protein
Nucleotide Protein
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