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zipt-2.4 Zinc transporter ZIP3 [ Caenorhabditis elegans ]

Gene ID: 172230, updated on 2-Nov-2024

Summary

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Official Symbol
zipt-2.4
Official Full Name
Zinc transporter ZIP3
Primary source
WormBase:WBGene00018897
Locus tag
CELE_F55F8.9
See related
AllianceGenome:WB:WBGene00018897
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable zinc ion transmembrane transporter activity. Predicted to be involved in zinc ion transmembrane transport. Predicted to be located in apical plasma membrane. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See zipt-2.4 in Genome Data Viewer
Location:
chromosome: I
Exon count:
8
Sequence:
Chromosome: I; NC_003279.8 (5669945..5673352, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene SSD domain-containing protein Neighboring gene Secreted protein Neighboring gene Uncharacterized protein Neighboring gene Mitochondrial import inner membrane translocase subunit TIM14

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Zinc transporters ZIPT-2.4 and ZIPT-15 are required for normal C. elegans fecundity. Sue AC, et al. J Assist Reprod Genet, 2022 Jun. PMID 35501415, Free PMC Article
  2. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
  3. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
  4. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables metal ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in metal ion transport IEA
Inferred from Electronic Annotation
more info
  
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in zinc ion transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in zinc ion transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Zinc transporter ZIP3
NP_001249971.1
  • Confirmed by transcript evidence
NP_001367898.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    5669945..5673352 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001380347.2 → NP_001367898.1  Zinc transporter ZIP3 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    P91348
    Conserved Domains (1) summary
    pfam02535
    Location:4 → 438
    Zip; ZIP Zinc transporter

  2. NM_001263042.2 → NP_001249971.1  Zinc transporter ZIP3 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001249971.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G4SKK4
    Conserved Domains (1) summary
    pfam02535
    Location:4 → 402
    Zip; ZIP Zinc transporter
Nucleotide Protein
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