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ctg-1 Protein ctg-1 [ Caenorhabditis elegans ]

Gene ID: 172431, updated on 9-Dec-2024

Summary

Official Symbol
ctg-1
Official Full Name
Protein ctg-1
Primary source
WormBase:WBGene00010370
Locus tag
CELE_H06O01.3
See related
AllianceGenome:WB:WBGene00010370
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Involved in regulation of basement membrane organization. Predicted to be located in cytosol. Predicted to be active in cytoplasm. Orthologous to several human genes including SEC14L2 (SEC14 like lipid binding 2); SEC14L3 (SEC14 like lipid binding 3); and SEC14L4 (SEC14 like lipid binding 4). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See ctg-1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
8
Sequence:
Chromosome: I; NC_003279.8 (7005443..7009200)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene AbLIM_anchor domain-containing protein Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene DNA helicase Neighboring gene ncRNA Neighboring gene Protein disulfide-isomerase

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in regulation of basement membrane organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Protein ctg-1
NP_001263451.1
  • Confirmed by transcript evidence
NP_001263452.1
  • Confirmed by transcript evidence
NP_491993.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    7005443..7009200
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_059592.6NP_491993.1  Protein ctg-1 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    K8ES75, K8F7T8, O17907
    Conserved Domains (1) summary
    smart00516
    Location:73244
    SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
  2. NM_001276522.3NP_001263451.1  Protein ctg-1 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    K8ES75
    Conserved Domains (1) summary
    smart00516
    Location:13149
    SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
  3. NM_001276523.3NP_001263452.1  Protein ctg-1 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    K8F7T8
    Conserved Domains (1) summary
    smart00516
    Location:1100
    SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)