U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

rpl-23A.2 Large ribosomal subunit protein uL23B [ Caenorhabditis elegans ]

Gene ID: 172617, updated on 9-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
rpl-23A.2
Official Full Name
Large ribosomal subunit protein uL23B
Primary source
WormBase:WBGene00004439
Locus tag
CELE_F52B5.6
See related
AllianceGenome:WB:WBGene00004439
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Orthologous to human RPL23A (ribosomal protein L23a). [provided by Alliance of Genome Resources, Dec 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See rpl-23A.2 in Genome Data Viewer
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003279.8 (8329062..8329647, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene RNA helicase Neighboring gene Transcription factor cep-1 Neighboring gene UPAR/Ly6 domain-containing protein Neighboring gene histone acetyltransferase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The SNAPc complex mediates starvation-induced trans-splicing in Caenorhabditis elegans. Hou X, et al. J Genet Genomics, 2022 Oct. PMID 35283340
  2. Autosomal genes of autosomal/X-linked duplicated gene pairs and germ-line proliferation in Caenorhabditis elegans. Maciejowski J, et al. Genetics, 2005 Apr. PMID 15687263, Free PMC Article
  3. RbAp46/48(LIN-53) Is Required for Holocentromere Assembly in Caenorhabditis elegans. Lee BC, et al. Cell Rep, 2016 Mar 1. PMID 26904949
  4. Functional genomic analysis of C. elegans chromosome I by systematic RNA interference. Fraser AG, et al. Nature, 2000 Nov 16. PMID 11099033
  5. Combinatorial RNA interference in Caenorhabditis elegans reveals that redundancy between gene duplicates can be maintained for more than 80 million years of evolution. Tischler J, et al. Genome Biol, 2006. PMID 16884526, Free PMC Article

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Large ribosomal subunit protein uL23B
NP_001369950.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    8329062..8329647 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001383465.2 → NP_001369950.1  Large ribosomal subunit protein uL23B [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q20647
    Conserved Domains (1) summary
    PTZ00191
    Location:1 → 146
    PTZ00191; 60S ribosomal protein L23a; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q20647.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases
Research Materials
Tools