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eva-1 Protein eva-1;SUEL-type lectin domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 173355, updated on 4-Jan-2025

Summary

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Official Symbol
eva-1
Official Full Name
Protein eva-1;SUEL-type lectin domain-containing protein
Primary source
WormBase:WBGene00009304
Locus tag
CELE_F32A7.3
See related
AllianceGenome:WB:WBGene00009304
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable carbohydrate binding activity. Located in M band; cell junction; and striated muscle dense body. Is expressed in body wall musculature; hypodermis; pharyngeal muscle cell; and ventral nerve cord. Orthologous to human EVA1C (eva-1 homolog C). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See eva-1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
10
Sequence:
Chromosome: I; NC_003279.8 (14829732..14834841, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene Transmembrane protein Neighboring gene Methyltransferase-like protein 17, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The MADD-3 LAMMER Kinase Interacts with a p38 MAP Kinase Pathway to Regulate the Display of the EVA-1 Guidance Receptor in Caenorhabditis elegans. D'Souza SA, et al. PLoS Genet, 2016 Apr. PMID 27123983, Free PMC Article
  2. The slit receptor EVA-1 coactivates a SAX-3/Robo mediated guidance signal in C. elegans. Fujisawa K, et al. Science, 2007 Sep 28. PMID 17901337
  3. Distinct cell guidance pathways controlled by the Rac and Rho GEF domains of UNC-73/TRIO in Caenorhabditis elegans. Marcus-Gueret N, et al. Genetics, 2012 Jan. PMID 21996675, Free PMC Article
  4. EVA-1 functions as an UNC-40 Co-receptor to enhance attraction to the MADD-4 guidance cue in Caenorhabditis elegans. Chan KK, et al. PLoS Genet, 2014 Aug. PMID 25122090, Free PMC Article
  5. Systematic Functional Characterization of Human 21st Chromosome Orthologs in Caenorhabditis elegans. Nordquist SK, et al. G3 (Bethesda), 2018 Mar 2. PMID 29367452, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in M band HDA PubMed 
located_in cell junction HDA PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in striated muscle dense body HDA PubMed 

General protein information

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Preferred Names
Protein eva-1;SUEL-type lectin domain-containing protein
NP_001309519.1
  • Confirmed by transcript evidence
NP_001366909.1
  • Confirmed by transcript evidence
NP_493590.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    14829732..14834841 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001381268.1 → NP_001366909.1  Protein eva-1 [Caenorhabditis elegans]

    Status: REVIEWED

    Conserved Domains (1) summary
    pfam02140
    Location:4 → 54
    Gal_Lectin; Galactose binding lectin domain

  2. NM_061189.7 → NP_493590.2  Protein eva-1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_493590.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P91865, Q9XU98
    Conserved Domains (1) summary
    pfam02140
    Location:63 → 159
    Gal_Lectin; Galactose binding lectin domain

  3. NM_001322695.3 → NP_001309519.1  SUEL-type lectin domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A131MCP4
    Conserved Domains (1) summary
    pfam02140
    Location:72 → 168
    Gal_Lectin; Galactose binding lectin domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9XU98.2

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