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Mip major intrinsic protein of lens fiber [ Mus musculus (house mouse) ]

Gene ID: 17339, updated on 27-Nov-2024

Summary

Official Symbol
Mipprovided by MGI
Official Full Name
major intrinsic protein of lens fiberprovided by MGI
Primary source
MGI:MGI:96990
See related
Ensembl:ENSMUSG00000025389 AllianceGenome:MGI:96990
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Cat; Cts; Hfi; Lop; Svl; Aqp0; MP26; MIP26; shrivelled
Summary
Enables water channel activity. A structural constituent of eye lens. Acts upstream of or within lens development in camera-type eye; visual perception; and water transport. Located in plasma membrane. Is expressed in several structures, including eye; femur; and main olfactory bulb. Used to study cataract 15 multiple types. Human ortholog(s) of this gene implicated in cataract and cataract 15 multiple types. Orthologous to human MIP (major intrinsic protein of lens fiber). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See Mip in Genome Data Viewer
Location:
10 D3; 10 76.49 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (128061679..128067681)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (128225810..128231812)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E11760 Neighboring gene predicted gene 4556 Neighboring gene glutaminase 2 (liver, mitochondrial) Neighboring gene STARR-positive B cell enhancer ABC_E725 Neighboring gene STARR-positive B cell enhancer ABC_E10659 Neighboring gene SPRY domain containing 4 Neighboring gene predicted gene, 26847 Neighboring gene timeless circadian clock 1 Neighboring gene STARR-seq mESC enhancer starr_28273 Neighboring gene apolipoprotein N

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables calmodulin binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables cell adhesion mediator activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables channel activity NAS
Non-traceable Author Statement
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables structural constituent of eye lens IDA
Inferred from Direct Assay
more info
PubMed 
enables water channel activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables water channel activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables water channel activity ISO
Inferred from Sequence Orthology
more info
 
enables water channel activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in canalicular bile acid transport ISO
Inferred from Sequence Orthology
more info
 
involved_in cell communication NAS
Non-traceable Author Statement
more info
PubMed 
involved_in gap junction-mediated intercellular transport IEA
Inferred from Electronic Annotation
more info
 
involved_in gap junction-mediated intercellular transport ISO
Inferred from Sequence Orthology
more info
 
involved_in homotypic cell-cell adhesion ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within lens development in camera-type eye IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in maintenance of lens transparency ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of cell adhesion ISO
Inferred from Sequence Orthology
more info
 
involved_in protein homotetramerization ISO
Inferred from Sequence Orthology
more info
 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within visual perception IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in water transport IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within water transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in water transport ISO
Inferred from Sequence Orthology
more info
 
involved_in water transport ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in anchoring junction IEA
Inferred from Electronic Annotation
more info
 
is_active_in apical plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
located_in intracellular canaliculus ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane NAS
Non-traceable Author Statement
more info
PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
lens fiber major intrinsic protein
Names
aquaporin-0
cataract and small eye
dominant cataract
hydropic fibers
lens opacity
major intrinsic protein of eye lens fiber
NP_032626.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008600.5NP_032626.2  lens fiber major intrinsic protein

    See identical proteins and their annotated locations for NP_032626.2

    Status: VALIDATED

    Source sequence(s)
    AI323353, AK136287, BB651737
    Consensus CDS
    CCDS24265.1
    UniProtKB/Swiss-Prot
    O00285, P51180, Q3UWJ9, Q8BHA2
    UniProtKB/TrEMBL
    Q640N8
    Related
    ENSMUSP00000026455.8, ENSMUST00000026455.8
    Conserved Domains (1) summary
    pfam00230
    Location:3219
    MIP; Major intrinsic protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    128061679..128067681
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)