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C09E8.1 Sodium-and chloride-dependent glycine transporter 2 [ Caenorhabditis elegans ]

Gene ID: 173447, updated on 14-Nov-2024

Summary

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Official Symbol
C09E8.1
Official Full Name
Sodium-and chloride-dependent glycine transporter 2
Primary source
WormBase:WBGene00015644
Locus tag
CELE_C09E8.1
See related
AllianceGenome:WB:WBGene00015644
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable glycine:sodium symporter activity. Predicted to be involved in glycine import across plasma membrane and sodium ion transmembrane transport. Predicted to be located in membrane. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C09E8.1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
13
Sequence:
Chromosome: II; NC_003280.10 (556485..564061)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene F-box associated domain-containing protein Neighboring gene F-box domain-containing protein Neighboring gene Molting protein mlt-10 Neighboring gene LIPaSe related;Triacylglycerol lipase Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene Nodule-specific Glycine Rich Peptide Neighboring gene Uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables glycine:sodium symporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables symporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in amino acid transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in gamma-aminobutyric acid transport IEA
Inferred from Electronic Annotation
more info
  
involved_in glycine transport IEA
Inferred from Electronic Annotation
more info
  
involved_in sodium ion transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Sodium-and chloride-dependent glycine transporter 2
NP_493757.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    556485..564061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_061356.8 → NP_493757.2  Sodium-and chloride-dependent glycine transporter 2 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_493757.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KYM8
    Conserved Domains (1) summary
    cl00456
    Location:29 → 463
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

RNA

  1. NR_133622.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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