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math-42 MATH domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 173566, updated on 4-Jan-2025

Summary

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Official Symbol
math-42
Official Full Name
MATH domain-containing protein
Primary source
WormBase:WBGene00020532
Locus tag
CELE_T16A1.1
See related
AllianceGenome:WB:WBGene00020532
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in intestine. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See math-42 in Genome Data Viewer
Location:
chromosome: II
Exon count:
12
Sequence:
Chromosome: II; NC_003280.10 (2099926..2104180)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene F-box associated domain-containing protein Neighboring gene protein of unknown function WSN domain-containing protein Neighboring gene pseudo Neighboring gene DUF281 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
MATH domain-containing protein
NP_001364517.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    2099926..2104180
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001377713.4 → NP_001364517.1  MATH domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9MN87
    Conserved Domains (2) summary
    smart00061
    Location:438 → 528
    MATH; meprin and TRAF homology
    pfam00917
    Location:12 → 125
    MATH; MATH domain
Nucleotide Protein
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