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bath-9 BTB domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 173681, updated on 17-Oct-2024

Summary

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Official Symbol
bath-9
Official Full Name
BTB domain-containing protein
Primary source
WormBase:WBGene00021725
Locus tag
CELE_Y49F6C.3
See related
AllianceGenome:WB:WBGene00021725
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See bath-9 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003280.10 (3377089..3378834)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene BTB and MATH domain containing Neighboring gene BTB domain-containing protein Neighboring gene pseudo Neighboring gene Type I restriction endonuclease subunit R;Type VI secretion system protein TssA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Screening for cold tolerance genes in C. elegans, whose expressions are affected by anticancer drugs camptothecin and leptomycin B. Okahata M, et al. Sci Rep, 2024 Mar 5. PMID 38443452, Free PMC Article
  2. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
BTB domain-containing protein
NP_494524.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    3377089..3378834
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_062123.4 → NP_494524.1  BTB domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_494524.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9TYJ0
    Conserved Domains (3) summary
    smart00225
    Location:146 → 241
    BTB; Broad-Complex, Tramtrack and Bric a brac
    pfam00651
    Location:133 → 237
    BTB; BTB/POZ domain
    pfam00917
    Location:11 → 123
    MATH; MATH domain
Nucleotide Protein
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