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ZK546.2 Leucine-rich repeat-containing protein 57 [ Caenorhabditis elegans ]

Gene ID: 173855, updated on 9-Dec-2024

Summary

Official Symbol
ZK546.2
Official Full Name
Leucine-rich repeat-containing protein 57
Primary source
WormBase:WBGene00022759
Locus tag
CELE_ZK546.2
See related
AllianceGenome:WB:WBGene00022759
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be active in cytoplasm. Orthologous to human LRRC57 (leucine rich repeat containing 57). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See ZK546.2 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003280.10 (4946027..4948070)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Secreted protein Neighboring gene ncRNA Neighboring gene Mediator of RNA polymerase II transcription subunit 4 Neighboring gene Ribosomal RNA-processing protein 14/surfeit locus protein 6 C-terminal domain-containing protein;SURF6 homolog gldi-11 Neighboring gene Peptidase S1 domain-containing protein Neighboring gene Zygote defective protein 12

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
Leucine-rich repeat-containing protein 57
NP_001380033.1
  • Confirmed by transcript evidence
NP_740983.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    4946027..4948070
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_170985.5NP_740983.2  Leucine-rich repeat-containing protein 57 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_740983.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q23526, Q23527
    Conserved Domains (4) summary
    cd00116
    Location:208460
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:264286
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12799
    Location:65107
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:308364
    LRR_8; Leucine rich repeat
  2. NM_001393057.1NP_001380033.1  Leucine-rich repeat-containing protein 57 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95PW8
    Conserved Domains (2) summary
    COG4886
    Location:37209
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:4062
    LRR_RI; leucine-rich repeat [structural motif]

RNA

  1. NR_151581.1 RNA Sequence

    Status: REVIEWED