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ttc-36 Tetratricopeptide repeat protein 36 [ Caenorhabditis elegans ]

Gene ID: 174562, updated on 4-Jan-2025

Summary

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Official Symbol
ttc-36
Official Full Name
Tetratricopeptide repeat protein 36
Primary source
WormBase:WBGene00009947
Locus tag
CELE_F52H3.5
See related
AllianceGenome:WB:WBGene00009947
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in tyrosine metabolic process. Is expressed in hypodermis; intestine; and pharynx. Orthologous to human TTC36 (tetratricopeptide repeat domain 36). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See ttc-36 in Genome Data Viewer
Location:
chromosome: II
Exon count:
4
Sequence:
Chromosome: II; NC_003280.10 (10030190..10030970)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Serine/threonine-protein phosphatase Neighboring gene ncRNA Neighboring gene Protein MTO1 homolog, mitochondrial Neighboring gene Procollagen-lysine,2-oxoglutarate 5-dioxygenase Neighboring gene SPK domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chaperone-interacting TPR proteins in Caenorhabditis elegans. Haslbeck V, et al. J Mol Biol, 2013 Aug 23. PMID 23727266
  2. The non-canonical Hop protein from Caenorhabditis elegans exerts essential functions and forms binary complexes with either Hsc70 or Hsp90. Gaiser AM, et al. J Mol Biol, 2009 Aug 21. PMID 19559711
  3. Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly. Schaan Profes M, et al. PLoS Biol, 2024 Jan. PMID 38252619, Free PMC Article
  4. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
  5. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in tyrosine metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Tetratricopeptide repeat protein 36
NP_496168.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    10030190..10030970
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063767.4 → NP_496168.1  Tetratricopeptide repeat protein 36 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496168.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q20683
    Conserved Domains (3) summary
    sd00006
    Location:46 → 71
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:77 → 106
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:43 → 107
    TPR_11; TPR repeat
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q20683.1

Gene LinkOut

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