Y57A10A.13 3'-5' exonuclease domain-containing protein [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: Y57A10A.13
Official Full Name: 3'-5' exonuclease domain-containing protein
Primary source: WormBase:WBGene00013256
Locus tag: CELE_Y57A10A.13
See related: AllianceGenome:WB:WBGene00013256
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable 3'-5' exonuclease activity. Predicted to be involved in nucleobase-containing compound metabolic process. Predicted to be active in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See Y57A10A.13 in Genome Data Viewer

Location:: chromosome: II

Exon count:: 8

Sequence:: Chromosome: II; NC_003280.10 (12176880..12184902, complement)

Chromosome II - NC_003280.10 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

Y57A10A.k (e-PCR)
- UniSTS:323980

STS2-198 (e-PCR)
- UniSTS:241871

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables 3'-5' exonuclease activity	IBA Inferred from Biological aspect of Ancestor more info
enables 3'-5' exonuclease activity	IEA Inferred from Electronic Annotation more info
enables exonuclease activity	IEA Inferred from Electronic Annotation more info
enables nucleic acid binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in nucleobase-containing compound metabolic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: 3'-5' exonuclease domain-containing protein

NP_496590.1

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003280.10 Reference assembly

Range

12176880..12184902 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_064189.6 → NP_496590.1 3'-5' exonuclease domain-containing protein [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_496590.1

Status: REVIEWED

UniProtKB/TrEMBL

Q9NA69

Conserved Domains (1) summary

cl10012
Location:432 → 677

DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily