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spig-16 Knottin scorpion toxin-like domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 174930, updated on 2-Nov-2024

Summary

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Official Symbol
spig-16
Official Full Name
Knottin scorpion toxin-like domain-containing protein
Primary source
WormBase:WBGene00009400
Locus tag
CELE_F35C5.12
See related
AllianceGenome:WB:WBGene00009400
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in defense response. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See spig-16 in Genome Data Viewer
Location:
chromosome: II
Exon count:
4
Sequence:
Chromosome: II; NC_003280.10 (12910229..12914564, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene C-type lectin domain-containing protein Neighboring gene Secreted protein Neighboring gene Protein sleepless Neighboring gene C2H2-type domain-containing protein Neighboring gene Argonaute protein wago-4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in defense response IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Knottin scorpion toxin-like domain-containing protein
NP_496749.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    12910229..12914564 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_064348.7 → NP_496749.1  Knottin scorpion toxin-like domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496749.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EEA5
Nucleotide Protein
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