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arrd-13 Arrestin C-terminal-like domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 175022, updated on 9-Dec-2024

Summary

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Official Symbol
arrd-13
Official Full Name
Arrestin C-terminal-like domain-containing protein
Primary source
WormBase:WBGene00011054
Locus tag
CELE_R06B9.3
See related
AllianceGenome:WB:WBGene00011054
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in protein transport. Predicted to be active in cytoplasm. Orthologous to several human genes including ARRDC2 (arrestin domain containing 2). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See arrd-13 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003280.10 (13758408..13761235)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Protein wntless homolog Neighboring gene Arrestin C-terminal-like domain-containing protein Neighboring gene Arrestin C-terminal-like domain-containing protein Neighboring gene Arrestin-like N-terminal domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Integrating interactome, phenome, and transcriptome mapping data for the C. elegans germline. Walhout AJ, et al. Curr Biol, 2002 Nov 19. PMID 12445390
  2. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
  3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  4. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
  5. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in protein transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Arrestin C-terminal-like domain-containing protein
NP_496882.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    13758408..13761235
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_064481.7 → NP_496882.1  Arrestin C-terminal-like domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496882.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O17982
    Conserved Domains (2) summary
    smart01017
    Location:182 → 332
    Arrestin_C; Arrestin (or S-antigen), C-terminal domain
    pfam00339
    Location:6 → 159
    Arrestin_N; Arrestin (or S-antigen), N-terminal domain
Nucleotide Protein
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