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C13B4.1 Cytochrome b561 domain-containing protein;DOMON domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 175104, updated on 2-Nov-2024

Summary

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Official Symbol
C13B4.1
Official Full Name
Cytochrome b561 domain-containing protein;DOMON domain-containing protein
Primary source
WormBase:WBGene00007545
Locus tag
CELE_C13B4.1
See related
AllianceGenome:WB:WBGene00007545
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be active in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C13B4.1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
13
Sequence:
Chromosome: II; NC_003280.10 (14470371..14479633, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA-Gln Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ubiquitin carboxyl-terminal hydrolase 14

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Cytochrome b561 domain-containing protein;DOMON domain-containing protein
NP_001293581.1
  • Confirmed by transcript evidence
NP_001360457.1
  • Confirmed by transcript evidence
NP_001360458.1
  • Confirmed by transcript evidence
NP_001370236.1
  • Confirmed by transcript evidence
NP_497005.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    14470371..14479633 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001373819.2 → NP_001360458.1  DOMON domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A486WTC7
    Conserved Domains (3) summary
    cd08760
    Location:703 → 916
    Cyt_b561_FRRS1_like; Eukaryotic cytochrome b(561), including the FRRS1 gene product
    cd09628
    Location:193 → 367
    DOMON_SDR_2_like; DOMON domain of stromal cell-derived receptor 2 (ferric chelate reductase 1) and related proteins
    smart00664
    Location:398 → 555
    DoH; Possible catecholamine-binding domain present in a variety of eukaryotic proteins

  2. NM_064604.6 → NP_497005.2  DOMON domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_497005.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O45247
    Conserved Domains (3) summary
    cd08760
    Location:703 → 916
    Cyt_b561_FRRS1_like; Eukaryotic cytochrome b(561), including the FRRS1 gene product
    cd09628
    Location:193 → 367
    DOMON_SDR_2_like; DOMON domain of stromal cell-derived receptor 2 (ferric chelate reductase 1) and related proteins
    smart00664
    Location:398 → 555
    DoH; Possible catecholamine-binding domain present in a variety of eukaryotic proteins

  3. NM_001373820.2 → NP_001360457.1  DOMON domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A486WXC8
    Conserved Domains (3) summary
    cd08760
    Location:718 → 931
    Cyt_b561_FRRS1_like; Eukaryotic cytochrome b(561), including the FRRS1 gene product
    cd09628
    Location:193 → 367
    DOMON_SDR_2_like; DOMON domain of stromal cell-derived receptor 2 (ferric chelate reductase 1) and related proteins
    smart00664
    Location:398 → 555
    DoH; Possible catecholamine-binding domain present in a variety of eukaryotic proteins

  4. NM_001306652.3 → NP_001293581.1  Cytochrome b561 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293581.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    U4PRV8
    Conserved Domains (1) summary
    cd08760
    Location:2 → 161
    Cyt_b561_FRRS1_like; Eukaryotic cytochrome b(561), including the FRRS1 gene product

  5. NM_001383994.2 → NP_001370236.1  DOMON domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A5Z2V3
    Conserved Domains (3) summary
    cd08760
    Location:703 → 916
    Cyt_b561_FRRS1_like; Eukaryotic cytochrome b(561), including the FRRS1 gene product
    cd09628
    Location:193 → 367
    DOMON_SDR_2_like; DOMON domain of stromal cell-derived receptor 2 (ferric chelate reductase 1) and related proteins
    smart00664
    Location:398 → 555
    DoH; Possible catecholamine-binding domain present in a variety of eukaryotic proteins
Nucleotide Protein
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