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idpp-1 SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 175228, updated on 9-Dec-2024

Summary

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Official Symbol
idpp-1
Official Full Name
SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein
Primary source
WormBase:WBGene00020550
Locus tag
CELE_T17H7.1
See related
AllianceGenome:WB:WBGene00020550
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in OLLL; OLLR; and pharynx. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See idpp-1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
3
Sequence:
Chromosome: III; NC_003281.10 (740682..742941)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene ETS domain-containing protein Neighboring gene ncRNA Neighboring gene VPSAGDMMVRF-amide Neighboring gene Protein pat-12 Neighboring gene ncRNA Neighboring gene Mucin-5AC

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. PETISCO is a novel protein complex required for 21U RNA biogenesis and embryonic viability. Cordeiro Rodrigues RJ, et al. Genes Dev, 2019 Jul 1. PMID 31147388, Free PMC Article
  2. A spatiotemporal reconstruction of the C. elegans pharyngeal cuticle reveals a structure rich in phase-separating proteins. Kamal M, et al. Elife, 2022 Oct 19. PMID 36259463, Free PMC Article
  3. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein
NP_497250.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    740682..742941
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_064849.7 → NP_497250.1  SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_497250.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q22537
    Conserved Domains (1) summary
    pfam02520
    Location:57 → 158
    DUF148; Domain of unknown function DUF148
Nucleotide Protein
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