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B0285.6 putative transporter B0285.6 [ Caenorhabditis elegans ]

Gene ID: 175563, updated on 4-Jan-2025

Summary

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Official Symbol
B0285.6
Official Full Name
putative transporter B0285.6
Primary source
WormBase:WBGene00007138
Locus tag
CELE_B0285.6
See related
AllianceGenome:WB:WBGene00007138
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable citrate transmembrane transporter activity and succinate transmembrane transporter activity. Predicted to be involved in citrate transport; succinate transport; and transmembrane transport. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in excretory cell. Orthologous to human SLC13A2 (solute carrier family 13 member 2). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See B0285.6 in Genome Data Viewer
Location:
chromosome: III
Exon count:
12
Sequence:
Chromosome: III; NC_003281.10 (4350099..4355979)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Leucine carboxyl methyltransferase 1 Neighboring gene D-glucuronyl C5-epimerase Neighboring gene pseudo Neighboring gene Matrix non-peptidase homolog 1 Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables citrate transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables succinate transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in citrate transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in succinate transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in succinate transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
putative transporter B0285.6
NP_001366690.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    4350099..4355979
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001381838.2 → NP_001366690.1  putative transporter B0285.6 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P46556
    Conserved Domains (1) summary
    cl21473
    Location:42 → 540
    ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P46556.3

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