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arle-14 ARF7 effector protein C-terminal domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 175790, updated on 4-Jan-2025

Summary

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Official Symbol
arle-14
Official Full Name
ARF7 effector protein C-terminal domain-containing protein
Primary source
WormBase:WBGene00015145
Locus tag
CELE_B0336.5
See related
AllianceGenome:WB:WBGene00015145
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be active in intracellular membrane-bounded organelle. Orthologous to human ARL14EP (ARF like GTPase 14 effector protein) and ARL14EPL (ARF like GTPase 14 effector protein like). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See arle-14 in Genome Data Viewer
Location:
chromosome: III
Exon count:
4
Sequence:
Chromosome: III; NC_003281.10 (5692906..5693938)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Adenosine 3'-phospho 5'-phosphosulfate transporter 2 Neighboring gene Calcipressin-like protein Neighboring gene SH3 domain-containing protein Neighboring gene Transcription initiation factor IIA small chain homolog Neighboring gene THAP-type domain-containing protein Neighboring gene Ubiquitin-like protein atg-12

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Regulated nuclear accumulation of a histone methyltransferase times the onset of heterochromatin formation in C. elegans embryos. Mutlu B, et al. Sci Adv, 2018 Aug. PMID 30140741, Free PMC Article
  2. Heterochromatic foci and transcriptional repression by an unstructured MET-2/SETDB1 co-factor LIN-65. Delaney CE, et al. J Cell Biol, 2019 Mar 4. PMID 30737265, Free PMC Article
  3. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  4. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  5. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
is_active_in intracellular membrane-bounded organelle IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
ARF7 effector protein C-terminal domain-containing protein
NP_001033343.1
  • Confirmed by transcript evidence
NP_001033344.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    5692906..5693938
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001038254.6 → NP_001033343.1  ARF7 effector protein C-terminal domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001033343.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q17483
    Conserved Domains (1) summary
    pfam14949
    Location:70 → 178
    ARF7EP_C; ARF7 effector protein C-terminus

  2. NM_001038255.8 → NP_001033344.1  ARF7 effector protein C-terminal domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001033344.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KY75
    Conserved Domains (1) summary
    pfam14949
    Location:73 → 181
    ARF7EP_C; ARF7 effector protein C-terminus
Nucleotide Protein
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