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F20H11.1 Differentially expressed in FDCP 8 homolog [ Caenorhabditis elegans ]

Gene ID: 175933, updated on 2-Nov-2024

Summary

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Official Symbol
F20H11.1
Official Full Name
Differentially expressed in FDCP 8 homolog
Primary source
WormBase:WBGene00017646
Locus tag
CELE_F20H11.1
See related
AllianceGenome:WB:WBGene00017646
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable metal ion binding activity. Orthologous to human DEF8 (differentially expressed in FDCP 8 homolog). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See F20H11.1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
8
Sequence:
Chromosome: III; NC_003281.10 (6589373..6592175, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Zinc finger protein 263 Neighboring gene AcetylCholine Receptor Neighboring gene D-aspartate oxidase 3 Neighboring gene ncRNA Neighboring gene Protein strawberry notch homolog Neighboring gene Malate dehydrogenase, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Differentially expressed in FDCP 8 homolog
NP_498454.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    6589373..6592175 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_066053.9 → NP_498454.2  Differentially expressed in FDCP 8 homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_498454.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O01738
    Conserved Domains (2) summary
    cd00029
    Location:161 → 212
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    pfam13901
    Location:259 → 467
    zf-RING_9; Putative zinc-RING and/or ribbon
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O01738.2

Gene LinkOut

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