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T20B12.3 Uncharacterized protein [ Caenorhabditis elegans ]

Gene ID: 176053, updated on 2-Nov-2024

Summary

Official Symbol
T20B12.3
Official Full Name
Uncharacterized protein
Primary source
WormBase:WBGene00020601
Locus tag
CELE_T20B12.3
See related
AllianceGenome:WB:WBGene00020601
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in ribosome biogenesis. Predicted to be located in intracellular membrane-bounded organelle. Predicted to be part of Noc4p-Nop14p complex and small-subunit processome. Predicted to be active in nucleolus. Orthologous to human NOC4L (nucleolar complex associated 4 homolog). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See T20B12.3 in Genome Data Viewer
Location:
chromosome: III
Exon count:
5
Sequence:
Chromosome: III; NC_003281.10 (7382115..7383905)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Anamorsin homolog Neighboring gene FACT complex subunit SSRP1-A Neighboring gene TATA-box-binding protein Neighboring gene Tetratricopeptide repeat-containing protein trd-1 Neighboring gene ncRNA

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of Noc4p-Nop14p complex IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 
is_active_in nucleolus IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of small-subunit processome IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
Uncharacterized protein
NP_498634.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    7382115..7383905
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_066233.6NP_498634.1  Uncharacterized protein CELE_T20B12.3 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_498634.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P41843
    Conserved Domains (2) summary
    pfam03914
    Location:247395
    CBF; CBF/Mak21 family
    cl00912
    Location:154251
    MmgE_PrpD; MmgE/PrpD family