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rpl-9 Large ribosomal subunit protein uL6 [ Caenorhabditis elegans ]

Gene ID: 176071, updated on 9-Dec-2024

Summary

Official Symbol
rpl-9
Official Full Name
Large ribosomal subunit protein uL6
Primary source
WormBase:WBGene00004420
Locus tag
CELE_R13A5.8
See related
AllianceGenome:WB:WBGene00004420
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be a structural constituent of ribosome. Involved in determination of adult lifespan. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in body wall musculature; excretory cell; intestine; pharynx; and tail. Orthologous to human RPL9 (ribosomal protein L9). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See rpl-9 in Genome Data Viewer
Location:
chromosome: III
Exon count:
3
Sequence:
Chromosome: III; NC_003281.10 (7572105..7572831, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Ligand-Gated ion Channel Neighboring gene Transthyretin-like family protein Neighboring gene Transthyretin-like family protein Neighboring gene FBA_2 domain-containing protein Neighboring gene ncRNA Neighboring gene Pescadillo homolog

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in cytoplasmic translation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in determination of adult lifespan IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Large ribosomal subunit protein uL6
NP_001370400.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    7572105..7572831 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001382918.2NP_001370400.1  Large ribosomal subunit protein uL6 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q95Y90
    Conserved Domains (1) summary
    cl30086
    Location:1186
    Ribosomal_L6; Ribosomal protein L6