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T12D8.9 Protein PFC0760c-like [ Caenorhabditis elegans ]

Gene ID: 176795, updated on 2-Nov-2024

Summary

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Official Symbol
T12D8.9
Official Full Name
Protein PFC0760c-like
Primary source
WormBase:WBGene00011736
Locus tag
CELE_T12D8.9
See related
AllianceGenome:WB:WBGene00011736
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in alimentary muscle; body wall musculature; and vulval muscle. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See T12D8.9 in Genome Data Viewer
Location:
chromosome: III
Exon count:
6
Sequence:
Chromosome: III; NC_003281.10 (13617104..13621444)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Actin Neighboring gene Carbohydrate kinase FGGY N-terminal domain-containing protein Neighboring gene STI1 domain-containing protein Neighboring gene Myosin-2 essential light chain Neighboring gene Transcription initiation factor TFIID subunit 9 Neighboring gene Secreted protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Shifted Transversal Design smart-pooling for high coverage interactome mapping. Xin X, et al. Genome Res, 2009 Jul. PMID 19447967, Free PMC Article
  2. SH3 interactome conserves general function over specific form. Xin X, et al. Mol Syst Biol, 2013. PMID 23549480, Free PMC Article
  3. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Protein PFC0760c-like
NP_001022758.1
  • Confirmed by transcript evidence
NP_001022759.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    13617104..13621444
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001027587.6 → NP_001022758.1  Protein PFC0760c-like [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001022758.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EBU8

  2. NM_001027588.8 → NP_001022759.1  Protein PFC0760c-like [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001022759.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EFT0
Nucleotide Protein
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